globalbioticinteractions / mangal

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your indexed records for @article{Douglass_2011, doi = {10.1007/s12237-010-9356-4}, url = {https://doi.org/10.1007%2Fs12237-010-9356-4}, year = 2011, month = {jan}, publisher = {Springer Nature}, volume = {34}, number = {4}, pages = {701--711}, author = {James G. Douglass and J. Emmett Duffy and Elizabeth A. Canuel}, title = {Food Web Structure in a Chesapeake Bay Eelgrass Bed as Determined through Gut Contents and 13C and 15N Isotope Analysis}, journal = {Estuaries and Coasts}} #1

Closed ddkapan closed 3 years ago

ddkapan commented 3 years ago

Hi!

Thanks for helping to make existing biotic interaction data easier to find and access!

I was just looking at your GloBI indexed record at https://www.globalbioticinteractions.org/?interactionType=interactsWith&sourceTaxon=Plantae&targetTaxon=Gammarus and I was wondering about the possibility of a REVERSED interaction where a PLANT ate an ANIMAL. For now I'll assume it is reversed, for future downloads of GLOBI data for a project I am working on it would be great to have this correct at the source.

Thanks,

Durrell Kapan California Academy of Sciences.

jhpoelen commented 3 years ago

hey @ddkapan - thanks for reporting this suspicious interaction.

I believe I traced the suspicious interactions to network 113 in mangal.io - it appears that their herbivory and detrivore interactions were flipped.

from https://mangal.io/api/v2/interaction?network_id=1113 -

{"id":67171,"node_from":14643,"node_to":14654,"date":"2006-05-19T00:00:00.000Z","direction":"directed","type":"herbivory","method":"observation","attr_id":1,"value":1,"geom":null,"public":true,"network_id":1113,"created_at":"2019-02-27T00:25:21.659Z","updated_at":"2019-02-27T00:25:21.659Z","attribute":...

it appears in this interaction the plant was node_from and the plant eater was node_to , whereas other interactions of same type in different networks in mangal have the node_to point to the plant, and node_from to the plant eater.

So, as far as I can tell, this is a likely transcription error in mangal.

jhpoelen commented 3 years ago

Perhaps you can contact the maintainers of mangal (@tpoisot or @SteveViss) about this suspicious interaction.

tpoisot commented 3 years ago

We're aware of it and it'll be fixed soon - @ddkapan GLOBI is (in my understanding) not a data source, so don't hesitate to reach out if you find more suspicious interactions. Most of what is in mangal has been curated from the supp. mat. of papers, but we may have made a few mistakes.

jhpoelen commented 3 years ago

Thanks for responding so quickly. I am glad that GloBI was able to facilitate this exchange. Please holler as soon as you fix is so we can confirm and close this issue.

jhpoelen commented 3 years ago

Just for your information, it appears there's at least on existing Douglass 2011 interaction reported via mangal that has plants eating Gammarus sp. See attached screenshot related to https://www.globalbioticinteractions.org/?interactionType=eats&sourceTaxon=Plantae&targetTaxon=Gammarus .

Note that the attached interaction was tagged by the Encyclopedia of Life's refutation dataset as suspicious.

Screenshot from 2021-04-05 13-09-02

tpoisot commented 3 years ago

Fixed on our end

jhpoelen commented 3 years ago

In update 2021-05-03, I noticed that:

$ curl --silent "https://mangal.io/api/v2/interaction?network_id=1113" | jq '.[] | select(.id== 67171)'
{
  "id": 67171,
  "node_from": 14654,
  "node_to": 14643,
  "date": "2006-05-19T00:00:00.000Z",
  "direction": "directed",
  "type": "herbivory",
  "method": "observation",
  "attr_id": 1,
  "value": 1,
  "geom": null,
  "public": true,
  "network_id": 1113,
  "created_at": "2019-02-27T00:25:21.659Z",
  "updated_at": "2021-04-29T04:45:44.504Z",
  "attribute": {
    "id": 1,
    "name": "presence/absence",
    "description": "Presence or absence of a recorded interaction",
    "unit": null,
    "created_at": "2019-02-21T21:17:01.496Z",
    "updated_at": "2019-02-21T21:17:01.496Z"
  }
}

On https://github.com/globalbioticinteractions/mangal/issues/1#issuecomment-810670151 , the following was observed:

{
  "id": 67171,
  "node_from": 14643,
  "node_to": 14654,
  "date": "2006-05-19T00:00:00.000Z",
  "direction": "directed",
  "type": "herbivory",
  "method": "observation",
  "attr_id": 1,
  "value": 1,
  "geom": null,
  "public": true,
  "network_id": 1113,
  "created_at": "2019-02-27T00:25:21.659Z",
  "updated_at": "2019-02-27T00:25:21.659Z"
}

So, it appears that interaction with id 67171 was reversed from:

node 14643 -> node 14654

to:

node 14654 -> node 14643

on or before 2021-04-29T04:45:44.504Z ( 29 April 2021 )

jhpoelen commented 3 years ago

@tpoisot can you please confirm that:

The previous example (i.e., 67171) documents a corrected an interaction claim:

Unid. Macrophytes (plants) eats Gammarus

to:

Gammarus eats Unid. Macrophytes (plants)

However, it appears that some suspicious interactions remain, e.g.,

Zostera (eelgrass) preys on Gammarus mucronatus

remain.

via https://www.globalbioticinteractions.org/?accordingTo=globi%3Aglobalbioticinteractions%2Fmangal&interactionType=eats&sourceTaxon=Zostera

Screenshot from 2021-05-03 17-10-33

jhpoelen commented 3 years ago

Looks like network 1114 has some suspicious predation interactions https://mangal.io/api/v2/interaction?network_id=1114&type=predation -

https://mangal.io/api/v2/interaction?id=67195 (crustacean parts preying on Elasmopus)

and https://mangal.io/api/v2/interaction?network_id=1112&type=predation

https://mangal.io/api/v2/interaction?id=67138 - Zostera (eelgrass) preying on Gammarus mucronatus -

[
  {
    "id": 67134,
    "node_from": 14620,
    "node_to": 14632,
    "date": "2005-04-21T00:00:00.000Z",
    "direction": "directed",
    "type": "predation",
    "method": "observation",
    "attr_id": 1,
    "value": 1,
    "geom": null,
    "public": true,
    "network_id": 1112,
    "created_at": "2019-02-27T00:25:11.934Z",
    "updated_at": "2019-02-27T00:25:11.934Z",
    "attribute": {
      "id": 1,
      "name": "presence/absence",
      "description": "Presence or absence of a recorded interaction",
      "unit": null,
      "created_at": "2019-02-21T21:17:01.496Z",
      "updated_at": "2019-02-21T21:17:01.496Z"
    }
  }
]
jhpoelen commented 3 years ago

@tpoisot For your convenience, I've included a list of 48 refuted interaction records as provided by Encyclopedia of Life refutation dataset .

refuted_mangal_by_eol.tsv.txt

fyi @katjaschulz

tpoisot commented 3 years ago

I have sincerely no idea how to read this file

tpoisot commented 3 years ago

All I can say is:

1) we'll have a look 2) issues are more likely to be fixed if they're opened in the correct repo (https://github.com/mangal-wg/mangal-datasets)

jhpoelen commented 3 years ago

@tpoisot thanks for your prompt reply.

I have sincerely no idea how to read this file

if you'd like to learn more about the format of the refutation dataset that EOL uses, you might find some inspiration at https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol and issues like https://github.com/globalbioticinteractions/globalbioticinteractions/issues/376 .

issues are more likely to be fixed if they're opened in the correct repo (https://github.com/mangal-wg/mangal-datasets)

Ok, I'll try and add duplicate issues as suggested to reference issues posted elsewhere (e.g., https://github.com/globalbioticinteractions/mangal/issues/1 and https://github.com/mangal-wg/mangal-api/issues/55 ).

Question - I noticed that https://github.com/mangal-wg/mangal-datasets has not been updated since Oct 2020, but changes were made to records exposed through the mangal api. What is your procedure to keep https://github.com/mangal-wg/mangal-datasets in sync with the live mangal database / api?

tpoisot commented 3 years ago

The repo is just for initial upload - we then use the API for corrections when required.

FYI our effort is currently on migrating to a new cloud provider and updating the stack, so we won't be very reactive with data modifications.

As for the EOL format, I'm sure it's interesting, but we'd probably gain more from a plain English issue. Anyways, the issues are confined to a particular dataset, so we'll manually check it at some point in the future.

BenMerSci commented 3 years ago

Hi everyone!

@jhpoelen, interaction directions for network 1112, 1113 and 1114 are now resolved. As for the file with 48 refuted interactions you provided, I believe there is no header (at least I can't get any) so I don't really understand what is the content of each column. In each row I can only find one species therefore I can't trace back the exact interaction in the network. Is there a way to get the 2 species name that compose the refuted interactions?

I might have the time to check them.

And @tpoisot, you can read the .tsv.txt file in Julia with: DataFrame(readdlm("file.tsv.txt", '\t', '\n'), :auto)

tpoisot commented 3 years ago

I figured how to read the file 🙂 it's more the semantics that confused me

BenMerSci commented 3 years ago

I figured I wasn't going to teach you anything in Julia, it was just in case :wink:. And same I can't really figure out what the different entries mean.

jhpoelen commented 3 years ago

@BenMerSci @tpoisot thanks again for your prompt replies.

For what it is worth, the header of the refutation data:

$ curl --silent "https://editors.eol.org/eol_php_code/applications/content_server/resources/interactions.tsv" | head -n1
identifier  argumentTypeId  argumentTypeName    argumentReasonId    argumentReasonName  interactionTypeId   interactionTypeName sourceCitation  sourceArchiveURI    sourceTaxonId   sourceTaxonName sourceTaxonRanksourceTaxonKingdomName   targetTaxonId   targetTaxonName targetTaxonRank targetTaxonKingdomName  refuted:associationID   refuted:interactionTypeId   refuted:referenceCitation   refuted:referenceDoi    refuted:referenceUrl    refuted:sourceCitation  refuted:sourceOccurrenceId  refuted:sourceTaxonId   refuted:sourceTaxonName refuted:sourceTaxonRank refuted:sourceTaxonGenusName    refuted:sourceTaxonFamilyName   refuted:sourceTaxonOrderName    refuted:sourceTaxonClassName    refuted:sourceTaxonPhylumName   refuted:sourceTaxonKingdomName  refuted:targetOccurrenceId  refuted:targetTaxonId   refuted:targetTaxonName refuted:targetTaxonRank refuted:targetTaxonGenusName    refuted:targetTaxonFamilyName   refuted:targetTaxonOrderName    refuted:targetTaxonClassName    refuted:targetTaxonPhylumName   refuted:targetTaxonKingdomName

See also https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/main/globi.json for schema mappings.

jhpoelen commented 3 years ago

ps some network id to each interaction record can be added. Happy to add it if someone asks for it.

BenMerSci commented 3 years ago

For each row in the file, there is only 1 species for the refuted interaction. Do you know what is happening with that? With the network_id do you know by any chance if you would be able to get the interaction id? It would really make the investigation easier :sweat_smile:.

jhpoelen commented 3 years ago

For your convenience, I've added the mangal related refuted dataset below and attached.

refuted_mangal_by_eol_with_header.tsv.txt

I see a lot of names associated with the source (left side), and target (right side) of the interaction records.

I noticed that there might be some false positive refutation. It looks like the name "Fungal" maps to GBIF's https://www.gbif.org/species/4904189 which was somehow classified as a virus. This classification triggered the refutation rule.

Aside from that there's a bunch more. Please hollder if you have more questions.

identifier argumentTypeId argumentTypeName argumentReasonId argumentReasonName interactionTypeId interactionTypeName sourceCitation sourceArchiveURI sourceTaxonId sourceTaxonName sourceTaxonRank sourceTaxonKingdomName targetTaxonId targetTaxonName targetTaxonRank targetTaxonKingdomName refuted:associationID refuted:interactionTypeId refuted:referenceCitation refuted:referenceDoi refuted:referenceUrl refuted:sourceCitation refuted:sourceOccurrenceId refuted:sourceTaxonId refuted:sourceTaxonName refuted:sourceTaxonRank refuted:sourceTaxonGenusName refuted:sourceTaxonFamilyName refuted:sourceTaxonOrderName refuted:sourceTaxonClassName refuted:sourceTaxonPhylumName refuted:sourceTaxonKingdomName refuted:targetOccurrenceId refuted:targetTaxonId refuted:targetTaxonName refuted:targetTaxonRank refuted:targetTaxonGenusName refuted:targetTaxonFamilyName refuted:targetTaxonOrderName refuted:targetTaxonClassName refuted:targetTaxonPhylumName refuted:targetTaxonKingdomName
EOLrefute_globi:assoc:11402011-EOL:1035180-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:1035180 Paraleptophlebia adoptiva species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:1035180-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:1035180-ATE EOL:1035180 Paraleptophlebia adoptiva species Paraleptophlebia Leptophlebiidae Ephemeroptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:1035180-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:13605-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:13605 Tanytarsus genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:13605-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:13605-ATE EOL:13605 Tanytarsus genus Tanytarsus Chironomidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:13605-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:13605-PREYS_UPON-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:13605 Tanytarsus genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:13605-PREYS_UPON-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002439 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:13605-PREYS_UPON EOL:13605 Tanytarsus genus Tanytarsus Chironomidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:13605-PREYS_UPON-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:18138-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:18138 Antocha genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:18138-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:18138-ATE EOL:18138 Antocha genus Antocha Limoniidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:18138-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:18138-PREYS_UPON-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:18138 Antocha genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:18138-PREYS_UPON-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002439 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:18138-PREYS_UPON EOL:18138 Antocha genus Antocha Limoniidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:18138-PREYS_UPON-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:2762505-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:2762505 Baetis tricaudatus species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:2762505-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:2762505-ATE EOL:2762505 Baetis tricaudatus species Baetis Baetidae Ephemeroptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:2762505-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:312348-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:312348 Promoresia elegans species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:312348-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:312348-ATE EOL:312348 Promoresia elegans species Promoresia Elmidae Coleoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:312348-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:313893-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:313893 Optioservus fastiditus species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:313893-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:313893-ATE EOL:313893 Optioservus fastiditus species Optioservus Elmidae Coleoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:313893-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:321609-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:321609 Ephemerella subvaria species Metazoa GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:321609-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:321609-ATE EOL:321609 Ephemerella subvaria species Ephemerella Ephemerellidae Ephemeroptera Insecta Arthropoda Metazoa globi:occur:target:11402011-EOL:321609-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:38522-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:38522 Glossosoma genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:38522-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:38522-ATE EOL:38522 Glossosoma genus Glossosoma Glossosomatidae Trichoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:38522-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:38732-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:38732 Cheumatopsyche genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:38732-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:38732-ATE EOL:38732 Cheumatopsyche genus Cheumatopsyche Hydropsychidae Trichoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:38732-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:38783-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:38783 Micrasema genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:38783-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:38783-ATE EOL:38783 Micrasema genus Micrasema Brachycentridae Trichoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:38783-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:54832-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:54832 Cricotopus genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:54832-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:54832-ATE EOL:54832 Cricotopus genus Cricotopus Chironomidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:54832-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:54979-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:54979 Rheosmittia genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:54979-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:54979-ATE EOL:54979 Rheosmittia genus Rheosmittia Chironomidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:54979-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:55218-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:55218 Rheotanytarsus genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:55218-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:55218-ATE EOL:55218 Rheotanytarsus genus Rheotanytarsus Chironomidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:55218-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:56085-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:56085 Thienemanniella genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:56085-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:56085-ATE EOL:56085 Thienemanniella genus Thienemanniella Chironomidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:56085-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:56387-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:56387 Parametriocnemus genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:56387-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:56387-ATE EOL:56387 Parametriocnemus genus Parametriocnemus Chironomidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:56387-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:607485-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:607485 Glossosoma nigrior species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:607485-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:607485-ATE EOL:607485 Glossosoma nigrior species Glossosoma Glossosomatidae Trichoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:607485-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:608229-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:608229 Ceratopsyche sparna species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:608229-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:608229-ATE EOL:608229 Ceratopsyche sparna species Ceratopsyche Hydropsychidae Trichoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:608229-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:608232-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:608232 Ceratopsyche morosa species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:608232-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:608232-ATE EOL:608232 Ceratopsyche morosa species Ceratopsyche Hydropsychidae Trichoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:608232-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:608522-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:608522 Dolophilodes distinctus species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:608522-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:608522-ATE EOL:608522 Dolophilodes distinctus species Dolophilodes Philopotamidae Trichoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:608522-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:613185-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:613185 Paragnetina media species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:613185-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:613185-ATE EOL:613185 Paragnetina media species Paragnetina Perlidae Plecoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:613185-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL:615269-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL:615269 Paracapnia angulata species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL:615269-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL:615269-ATE EOL:615269 Paracapnia angulata species Paracapnia Capniidae Plecoptera Insecta Arthropoda Animalia globi:occur:target:11402011-EOL:615269-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL_V2:402810-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL_V2:402810 Nais simplex species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL_V2:402810-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL_V2:402810-ATE EOL_V2:402810 Nais simplex species Nais Tubificidae Haplotaxida Clitellata Annelida Animalia globi:occur:target:11402011-EOL_V2:402810-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-EOL_V2:402810-PREYS_UPON-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL_V2:402810 Nais simplex species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-EOL_V2:402810-PREYS_UPON-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002439 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-EOL_V2:402810-PREYS_UPON EOL_V2:402810 Nais simplex species Nais Tubificidae Haplotaxida Clitellata Annelida Animalia globi:occur:target:11402011-EOL_V2:402810-PREYS_UPON-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-GBIF:2001466-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2001466 Brachyptera genus Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-GBIF:2001466-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-GBIF:2001466-ATE GBIF:2001466 Brachyptera genus Brachyptera Taeniopterygidae Plecoptera Insecta Arthropoda Animalia globi:occur:target:11402011-GBIF:2001466-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11402011-IRMNG:10100056-ATE-GBIF:4904189 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation6 Records of other organisms parasitizing or eating viruses are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv IRMNG:10100056 Stempellina montivaga species Animalia GBIF:4904189 Fungal family Viruses globi:assoc:11402011-IRMNG:10100056-ATE-GBIF:4904189 http://purl.obolibrary.org/obo/RO_0002470 @article{Tavares_Cromar_1996, doi = {10.2307/2963482}, url = {https://doi.org/10.2307%2F2963482}, year = 1996, month = {feb}, publisher = {Wiley}, volume = {66}, number = {1}, pages = {91--113}, author = {Annette F. Tavares-Cromar and D. Dudley Williams}, title = {The Importance of Temporal Resolution in Food Web Analysis: Evidence from a Detritus-Based Stream}, journal = {Ecological Monographs}} 10.2307/2963482 https://esajournals.onlinelibrary.wiley.com/doi/abs/10.2307/2963482 https://mangal.io - the ecological interaction database. globi:occur:source:11402011-IRMNG:10100056-ATE IRMNG:10100056 Stempellina montivaga species Stempellina Chironomidae Diptera Insecta Arthropoda Animalia globi:occur:target:11402011-IRMNG:10100056-ATE-GBIF:4904189 GBIF:4904189 Fungal family   Fungal        
EOLrefute_globi:assoc:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:207207 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2891616 Erodium genus Plantae EOL_V2:207207 Engraulis mordax species Animalia globi:assoc:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:207207 http://purl.obolibrary.org/obo/RO_0002439 @article{Clarke_1967, doi = {10.1126/science.157.3795.1381}, url = {https://doi.org/10.1126%2Fscience.157.3795.1381}, year = 1967, month = {sep}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {157}, number = {3795}, pages = {1381--1389}, author = {T. A. Clarke and A. O. Fleehsig and R. W. Grigg}, title = {Ecological Studies during Project Sealab {II}: A sand-bottom community at depth of 61 meters and the fauna attracted to ''Sealab {II}'' are investigated}, journal = {Science}} 10.1126/science.157.3795.1381 https://doi.org/10.1126%2Fscience.157.3795.1381 https://mangal.io - the ecological interaction database. globi:occur:source:11412827-GBIF:2891616-PREYS_UPON GBIF:2891616 Erodium genus Erodium Geraniaceae Geraniales Magnoliopsida Tracheophyta Plantae globi:occur:target:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:207207 EOL_V2:207207 Engraulis mordax species Engraulis Engraulidae Clupeiformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:356299 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2891616 Erodium genus Plantae EOL_V2:356299 Trachurus lathami species Animalia globi:assoc:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:356299 http://purl.obolibrary.org/obo/RO_0002439 @article{Clarke_1967, doi = {10.1126/science.157.3795.1381}, url = {https://doi.org/10.1126%2Fscience.157.3795.1381}, year = 1967, month = {sep}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {157}, number = {3795}, pages = {1381--1389}, author = {T. A. Clarke and A. O. Fleehsig and R. W. Grigg}, title = {Ecological Studies during Project Sealab {II}: A sand-bottom community at depth of 61 meters and the fauna attracted to ''Sealab {II}'' are investigated}, journal = {Science}} 10.1126/science.157.3795.1381 https://doi.org/10.1126%2Fscience.157.3795.1381 https://mangal.io - the ecological interaction database. globi:occur:source:11412827-GBIF:2891616-PREYS_UPON GBIF:2891616 Erodium genus Erodium Geraniaceae Geraniales Magnoliopsida Tracheophyta Plantae globi:occur:target:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:356299 EOL_V2:356299 Trachurus lathami species Trachurus Carangidae Perciformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:222012 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2891616 Erodium genus Plantae EOL_V2:222012 Genyonemus lineatus species Animalia globi:assoc:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:222012 http://purl.obolibrary.org/obo/RO_0002439 @article{Clarke_1967, doi = {10.1126/science.157.3795.1381}, url = {https://doi.org/10.1126%2Fscience.157.3795.1381}, year = 1967, month = {sep}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {157}, number = {3795}, pages = {1381--1389}, author = {T. A. Clarke and A. O. Fleehsig and R. W. Grigg}, title = {Ecological Studies during Project Sealab {II}: A sand-bottom community at depth of 61 meters and the fauna attracted to ''Sealab {II}'' are investigated}, journal = {Science}} 10.1126/science.157.3795.1381 https://doi.org/10.1126%2Fscience.157.3795.1381 https://mangal.io - the ecological interaction database. globi:occur:source:11412827-GBIF:2891616-PREYS_UPON GBIF:2891616 Erodium genus Erodium Geraniaceae Geraniales Magnoliopsida Tracheophyta Plantae globi:occur:target:11412827-GBIF:2891616-PREYS_UPON-EOL_V2:222012 EOL_V2:222012 Genyonemus lineatus species Genyonemus Sciaenidae Perciformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11412827-GBIF:2891616-PREYS_UPON-EOL:2312 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2891616 Erodium genus Plantae EOL:2312 Cephalopoda class Animalia globi:assoc:11412827-GBIF:2891616-PREYS_UPON-EOL:2312 http://purl.obolibrary.org/obo/RO_0002439 @article{Clarke_1967, doi = {10.1126/science.157.3795.1381}, url = {https://doi.org/10.1126%2Fscience.157.3795.1381}, year = 1967, month = {sep}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {157}, number = {3795}, pages = {1381--1389}, author = {T. A. Clarke and A. O. Fleehsig and R. W. Grigg}, title = {Ecological Studies during Project Sealab {II}: A sand-bottom community at depth of 61 meters and the fauna attracted to ''Sealab {II}'' are investigated}, journal = {Science}} 10.1126/science.157.3795.1381 https://doi.org/10.1126%2Fscience.157.3795.1381 https://mangal.io - the ecological interaction database. globi:occur:source:11412827-GBIF:2891616-PREYS_UPON GBIF:2891616 Erodium genus Erodium Geraniaceae Geraniales Magnoliopsida Tracheophyta Plantae globi:occur:target:11412827-GBIF:2891616-PREYS_UPON-EOL:2312 EOL:2312 Cephalopoda class       Cephalopoda Mollusca Animalia
EOLrefute_globi:assoc:11413623-ALATaxon:NZOR-6-37786-ATE-GBIF:2333689 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv ALATaxon:NZOR-6-37786 Hippocrepis genus Plantae GBIF:2333689 Erosa genus Animalia globi:assoc:11413623-ALATaxon:NZOR-6-37786-ATE-GBIF:2333689 http://purl.obolibrary.org/obo/RO_0002470 @article{Havens_1992, doi = {10.1126/science.257.5073.1107}, url = {https://doi.org/10.1126%2Fscience.257.5073.1107}, year = 1992, month = {aug}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {257}, number = {5073}, pages = {1107--1109}, author = {K. Havens}, title = {Scale and Structure in Natural Food Webs}, journal = {Science}} 10.1126/science.257.5073.1107 https://doi.org/10.1126%2Fscience.257.5073.1107 https://mangal.io - the ecological interaction database. globi:occur:source:11413623-ALATaxon:NZOR-6-37786-ATE ALATaxon:NZOR-6-37786 Hippocrepis genus Hippocrepis Leguminosae Fabales Equisetopsida Charophyta Plantae globi:occur:target:11413623-ALATaxon:NZOR-6-37786-ATE-GBIF:2333689 GBIF:2333689 Erosa genus Erosa Synanceiidae Scorpaeniformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11413623-ALATaxon:https://id.biodiversity.org.au/node/apni/2889543-ATE-GBIF:2332887 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv ALATaxon:https://id.biodiversity.org.au/node/apni/2889543 Pisonia genus Plantae GBIF:2332887 Syngnathus genus Animalia globi:assoc:11413623-ALATaxon:https://id.biodiversity.org.au/node/apni/2889543-ATE-GBIF:2332887 http://purl.obolibrary.org/obo/RO_0002470 @article{Havens_1992, doi = {10.1126/science.257.5073.1107}, url = {https://doi.org/10.1126%2Fscience.257.5073.1107}, year = 1992, month = {aug}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {257}, number = {5073}, pages = {1107--1109}, author = {K. Havens}, title = {Scale and Structure in Natural Food Webs}, journal = {Science}} 10.1126/science.257.5073.1107 https://doi.org/10.1126%2Fscience.257.5073.1107 https://mangal.io - the ecological interaction database. globi:occur:source:11413623-ALATaxon:https://id.biodiversity.org.au/node/apni/2889543-ATE ALATaxon:https://id.biodiversity.org.au/node/apni/2889543 Pisonia genus Pisonia Nyctaginaceae Caryophyllales Equisetopsida Charophyta Plantae globi:occur:target:11413623-ALATaxon:https://id.biodiversity.org.au/node/apni/2889543-ATE-GBIF:2332887 GBIF:2332887 Syngnathus genus Syngnathus Syngnathidae Syngnathiformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11413623-ALATaxon:https://id.biodiversity.org.au/node/apni/2889543-ATE-GBIF:2333689 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv ALATaxon:https://id.biodiversity.org.au/node/apni/2889543 Pisonia genus Plantae GBIF:2333689 Erosa genus Animalia globi:assoc:11413623-ALATaxon:https://id.biodiversity.org.au/node/apni/2889543-ATE-GBIF:2333689 http://purl.obolibrary.org/obo/RO_0002470 @article{Havens_1992, doi = {10.1126/science.257.5073.1107}, url = {https://doi.org/10.1126%2Fscience.257.5073.1107}, year = 1992, month = {aug}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {257}, number = {5073}, pages = {1107--1109}, author = {K. Havens}, title = {Scale and Structure in Natural Food Webs}, journal = {Science}} 10.1126/science.257.5073.1107 https://doi.org/10.1126%2Fscience.257.5073.1107 https://mangal.io - the ecological interaction database. globi:occur:source:11413623-ALATaxon:https://id.biodiversity.org.au/node/apni/2889543-ATE ALATaxon:https://id.biodiversity.org.au/node/apni/2889543 Pisonia genus Pisonia Nyctaginaceae Caryophyllales Equisetopsida Charophyta Plantae globi:occur:target:11413623-ALATaxon:https://id.biodiversity.org.au/node/apni/2889543-ATE-GBIF:2333689 GBIF:2333689 Erosa genus Erosa Synanceiidae Scorpaeniformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11413623-EOL_V2:31052464-ATE-GBIF:2333689 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL_V2:31052464 Vulgaris genus Plantae GBIF:2333689 Erosa genus Animalia globi:assoc:11413623-EOL_V2:31052464-ATE-GBIF:2333689 http://purl.obolibrary.org/obo/RO_0002470 @article{Havens_1992, doi = {10.1126/science.257.5073.1107}, url = {https://doi.org/10.1126%2Fscience.257.5073.1107}, year = 1992, month = {aug}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {257}, number = {5073}, pages = {1107--1109}, author = {K. Havens}, title = {Scale and Structure in Natural Food Webs}, journal = {Science}} 10.1126/science.257.5073.1107 https://doi.org/10.1126%2Fscience.257.5073.1107 https://mangal.io - the ecological interaction database. globi:occur:source:11413623-EOL_V2:31052464-ATE EOL_V2:31052464 Vulgaris genus Vulgaris Asteraceae Asterales Magnoliopsida Tracheophyta Plantae globi:occur:target:11413623-EOL_V2:31052464-ATE-GBIF:2333689 GBIF:2333689 Erosa genus Erosa Synanceiidae Scorpaeniformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11413623-GBIF:10408522-ATE-GBIF:2333689 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:10408522 Crassiphycus genus Plantae GBIF:2333689 Erosa genus Animalia globi:assoc:11413623-GBIF:10408522-ATE-GBIF:2333689 http://purl.obolibrary.org/obo/RO_0002470 @article{Havens_1992, doi = {10.1126/science.257.5073.1107}, url = {https://doi.org/10.1126%2Fscience.257.5073.1107}, year = 1992, month = {aug}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {257}, number = {5073}, pages = {1107--1109}, author = {K. Havens}, title = {Scale and Structure in Natural Food Webs}, journal = {Science}} 10.1126/science.257.5073.1107 https://doi.org/10.1126%2Fscience.257.5073.1107 https://mangal.io - the ecological interaction database. globi:occur:source:11413623-GBIF:10408522-ATE GBIF:10408522 Crassiphycus genus Crassiphycus Gracilariaceae Gracilariales Florideophyceae Rhodophyta Plantae globi:occur:target:11413623-GBIF:10408522-ATE-GBIF:2333689 GBIF:2333689 Erosa genus Erosa Synanceiidae Scorpaeniformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11413623-GBIF:2965053-ATE-GBIF:2333689 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2965053 Triquetra genus Plantae GBIF:2333689 Erosa genus Animalia globi:assoc:11413623-GBIF:2965053-ATE-GBIF:2333689 http://purl.obolibrary.org/obo/RO_0002470 @article{Havens_1992, doi = {10.1126/science.257.5073.1107}, url = {https://doi.org/10.1126%2Fscience.257.5073.1107}, year = 1992, month = {aug}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {257}, number = {5073}, pages = {1107--1109}, author = {K. Havens}, title = {Scale and Structure in Natural Food Webs}, journal = {Science}} 10.1126/science.257.5073.1107 https://doi.org/10.1126%2Fscience.257.5073.1107 https://mangal.io - the ecological interaction database. globi:occur:source:11413623-GBIF:2965053-ATE GBIF:2965053 Triquetra genus Triquetra Fabaceae Fabales Magnoliopsida Tracheophyta Plantae globi:occur:target:11413623-GBIF:2965053-ATE-GBIF:2333689 GBIF:2333689 Erosa genus Erosa Synanceiidae Scorpaeniformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11413623-GBIF:3657639-ATE-GBIF:2333689 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:3657639 Eucentrum genus Plantae GBIF:2333689 Erosa genus Animalia globi:assoc:11413623-GBIF:3657639-ATE-GBIF:2333689 http://purl.obolibrary.org/obo/RO_0002470 @article{Havens_1992, doi = {10.1126/science.257.5073.1107}, url = {https://doi.org/10.1126%2Fscience.257.5073.1107}, year = 1992, month = {aug}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {257}, number = {5073}, pages = {1107--1109}, author = {K. Havens}, title = {Scale and Structure in Natural Food Webs}, journal = {Science}} 10.1126/science.257.5073.1107 https://doi.org/10.1126%2Fscience.257.5073.1107 https://mangal.io - the ecological interaction database. globi:occur:source:11413623-GBIF:3657639-ATE GBIF:3657639 Eucentrum genus Eucentrum Orchidaceae Asparagales Liliopsida Tracheophyta Plantae globi:occur:target:11413623-GBIF:3657639-ATE-GBIF:2333689 GBIF:2333689 Erosa genus Erosa Synanceiidae Scorpaeniformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11413623-GBIF:4210352-ATE-GBIF:2333689 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:4210352 Serrulata genus Plantae GBIF:2333689 Erosa genus Animalia globi:assoc:11413623-GBIF:4210352-ATE-GBIF:2333689 http://purl.obolibrary.org/obo/RO_0002470 @article{Havens_1992, doi = {10.1126/science.257.5073.1107}, url = {https://doi.org/10.1126%2Fscience.257.5073.1107}, year = 1992, month = {aug}, publisher = {American Association for the Advancement of Science ({AAAS})}, volume = {257}, number = {5073}, pages = {1107--1109}, author = {K. Havens}, title = {Scale and Structure in Natural Food Webs}, journal = {Science}} 10.1126/science.257.5073.1107 https://doi.org/10.1126%2Fscience.257.5073.1107 https://mangal.io - the ecological interaction database. globi:occur:source:11413623-GBIF:4210352-ATE GBIF:4210352 Serrulata genus Serrulata Asteraceae Asterales Magnoliopsida Tracheophyta Plantae globi:occur:target:11413623-GBIF:4210352-ATE-GBIF:2333689 GBIF:2333689 Erosa genus Erosa Synanceiidae Scorpaeniformes Actinopterygii Chordata Animalia
EOLrefute_globi:assoc:11426092-GBIF:2863960-PREYS_UPON-EOL_V2:343405 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2863960 Zostera genus Plantae EOL_V2:343405 Idotea balthica species Animalia globi:assoc:11426092-GBIF:2863960-PREYS_UPON-EOL_V2:343405 http://purl.obolibrary.org/obo/RO_0002439 @article{Douglass_2011, doi = {10.1007/s12237-010-9356-4}, url = {https://doi.org/10.1007%2Fs12237-010-9356-4}, year = 2011, month = {jan}, publisher = {Springer Nature}, volume = {34}, number = {4}, pages = {701--711}, author = {James G. Douglass and J. Emmett Duffy and Elizabeth A. Canuel}, title = {Food Web Structure in a Chesapeake Bay Eelgrass Bed as Determined through Gut Contents and 13C and 15N Isotope Analysis}, journal = {Estuaries and Coasts}} 10.1007/s12237-010-9356-4 https://doi.org/10.1007%2Fs12237-010-9356-4 https://mangal.io - the ecological interaction database. globi:occur:source:11426092-GBIF:2863960-PREYS_UPON GBIF:2863960 Zostera genus Zostera Zosteraceae Alismatales Liliopsida Tracheophyta Plantae globi:occur:target:11426092-GBIF:2863960-PREYS_UPON-EOL_V2:343405 EOL_V2:343405 Idotea balthica species Idotea Idoteidae Isopoda Malacostraca Arthropoda Animalia
EOLrefute_globi:assoc:11426092-GBIF:2863960-PREYS_UPON-EOL_V2:344200 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2863960 Zostera genus Plantae EOL_V2:344200 Gammarus mucronatus species Animalia globi:assoc:11426092-GBIF:2863960-PREYS_UPON-EOL_V2:344200 http://purl.obolibrary.org/obo/RO_0002439 @article{Douglass_2011, doi = {10.1007/s12237-010-9356-4}, url = {https://doi.org/10.1007%2Fs12237-010-9356-4}, year = 2011, month = {jan}, publisher = {Springer Nature}, volume = {34}, number = {4}, pages = {701--711}, author = {James G. Douglass and J. Emmett Duffy and Elizabeth A. Canuel}, title = {Food Web Structure in a Chesapeake Bay Eelgrass Bed as Determined through Gut Contents and 13C and 15N Isotope Analysis}, journal = {Estuaries and Coasts}} 10.1007/s12237-010-9356-4 https://doi.org/10.1007%2Fs12237-010-9356-4 https://mangal.io - the ecological interaction database. globi:occur:source:11426092-GBIF:2863960-PREYS_UPON GBIF:2863960 Zostera genus Zostera Zosteraceae Alismatales Liliopsida Tracheophyta Plantae globi:occur:target:11426092-GBIF:2863960-PREYS_UPON-EOL_V2:344200 EOL_V2:344200 Gammarus mucronatus species Gammarus Gammaridae Amphipoda Malacostraca Arthropoda Animalia
EOLrefute_globi:assoc:11426092-GBIF:2863960-PREYS_UPON-FBC:SLB:SpecCode:22328 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2863960 Zostera genus Plantae FBC:SLB:SpecCode:22328 Erichsonella attenuata species Animalia globi:assoc:11426092-GBIF:2863960-PREYS_UPON-FBC:SLB:SpecCode:22328 http://purl.obolibrary.org/obo/RO_0002439 @article{Douglass_2011, doi = {10.1007/s12237-010-9356-4}, url = {https://doi.org/10.1007%2Fs12237-010-9356-4}, year = 2011, month = {jan}, publisher = {Springer Nature}, volume = {34}, number = {4}, pages = {701--711}, author = {James G. Douglass and J. Emmett Duffy and Elizabeth A. Canuel}, title = {Food Web Structure in a Chesapeake Bay Eelgrass Bed as Determined through Gut Contents and 13C and 15N Isotope Analysis}, journal = {Estuaries and Coasts}} 10.1007/s12237-010-9356-4 https://doi.org/10.1007%2Fs12237-010-9356-4 https://mangal.io - the ecological interaction database. globi:occur:source:11426092-GBIF:2863960-PREYS_UPON GBIF:2863960 Zostera genus Zostera Zosteraceae Alismatales Liliopsida Tracheophyta Plantae globi:occur:target:11426092-GBIF:2863960-PREYS_UPON-FBC:SLB:SpecCode:22328 FBC:SLB:SpecCode:22328 Erichsonella attenuata species Erichsonella Idoteidae Isopoda Malacostraca    
EOLrefute_globi:assoc:11426092-GBIF:2863960-PREYS_UPON-EOL:1024600 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002439 preys on Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:2863960 Zostera genus Plantae EOL:1024600 Cymadusa compta species Animalia globi:assoc:11426092-GBIF:2863960-PREYS_UPON-EOL:1024600 http://purl.obolibrary.org/obo/RO_0002439 @article{Douglass_2011, doi = {10.1007/s12237-010-9356-4}, url = {https://doi.org/10.1007%2Fs12237-010-9356-4}, year = 2011, month = {jan}, publisher = {Springer Nature}, volume = {34}, number = {4}, pages = {701--711}, author = {James G. Douglass and J. Emmett Duffy and Elizabeth A. Canuel}, title = {Food Web Structure in a Chesapeake Bay Eelgrass Bed as Determined through Gut Contents and 13C and 15N Isotope Analysis}, journal = {Estuaries and Coasts}} 10.1007/s12237-010-9356-4 https://doi.org/10.1007%2Fs12237-010-9356-4 https://mangal.io - the ecological interaction database. globi:occur:source:11426092-GBIF:2863960-PREYS_UPON GBIF:2863960 Zostera genus Zostera Zosteraceae Alismatales Liliopsida Tracheophyta Plantae globi:occur:target:11426092-GBIF:2863960-PREYS_UPON-EOL:1024600 EOL:1024600 Cymadusa compta species Cymadusa Ampithoidae Amphipoda Malacostraca Arthropoda Animalia
EOLrefute_globi:assoc:11426092-GBIF:6-ATE-EOL_V2:39782 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv GBIF:6 Plantae kingdom Plantae EOL_V2:39782 Gammarus genus Animalia globi:assoc:11426092-GBIF:6-ATE-EOL_V2:39782 http://purl.obolibrary.org/obo/RO_0002470 @article{Douglass_2011, doi = {10.1007/s12237-010-9356-4}, url = {https://doi.org/10.1007%2Fs12237-010-9356-4}, year = 2011, month = {jan}, publisher = {Springer Nature}, volume = {34}, number = {4}, pages = {701--711}, author = {James G. Douglass and J. Emmett Duffy and Elizabeth A. Canuel}, title = {Food Web Structure in a Chesapeake Bay Eelgrass Bed as Determined through Gut Contents and 13C and 15N Isotope Analysis}, journal = {Estuaries and Coasts}} 10.1007/s12237-010-9356-4 https://doi.org/10.1007%2Fs12237-010-9356-4 https://mangal.io - the ecological interaction database. globi:occur:source:11426092-GBIF:6-ATE GBIF:6 Plantae kingdom           Plantae globi:occur:target:11426092-GBIF:6-ATE-EOL_V2:39782 EOL_V2:39782 Gammarus genus Gammarus Gammaridae Amphipoda Malacostraca Arthropoda Animalia
EOLrefute_globi:assoc:11484762-EOL_V2:281-ATE-EOL:1278 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL_V2:281 Plantae kingdom Plantae EOL:1278 Euphausiacea order Animalia globi:assoc:11484762-EOL_V2:281-ATE-EOL:1278 http://purl.obolibrary.org/obo/RO_0002470 @article{Vinogradov_1978, doi = {10.1007/bf00391640}, url = {https://doi.org/10.1007%2Fbf00391640}, year = 1978, publisher = {Springer Nature America, Inc}, volume = {48}, number = {4}, pages = {357--366}, author = {M. E. Vinogradov and E. A. Shushkina}, title = {Some development patterns of plankton communities in the upwelling areas of the Pacific Ocean}, journal = {Marine Biology}} 10.1007/bf00391640 https://doi.org/10.1007%2Fbf00391640 https://mangal.io - the ecological interaction database. globi:occur:source:11484762-EOL_V2:281-ATE EOL_V2:281 Plantae kingdom           Plantae globi:occur:target:11484762-EOL_V2:281-ATE-EOL:1278 EOL:1278 Euphausiacea order     Euphausiacea Malacostraca Arthropoda Animalia
EOLrefute_globi:assoc:11484762-EOL_V2:281-ATE-ITIS:610007 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL_V2:281 Plantae kingdom Plantae ITIS:610007 Gymnoplea superorder Animalia globi:assoc:11484762-EOL_V2:281-ATE-ITIS:610007 http://purl.obolibrary.org/obo/RO_0002470 @article{Vinogradov_1978, doi = {10.1007/bf00391640}, url = {https://doi.org/10.1007%2Fbf00391640}, year = 1978, publisher = {Springer Nature America, Inc}, volume = {48}, number = {4}, pages = {357--366}, author = {M. E. Vinogradov and E. A. Shushkina}, title = {Some development patterns of plankton communities in the upwelling areas of the Pacific Ocean}, journal = {Marine Biology}} 10.1007/bf00391640 https://doi.org/10.1007%2Fbf00391640 https://mangal.io - the ecological interaction database. globi:occur:source:11484762-EOL_V2:281-ATE EOL_V2:281 Plantae kingdom           Plantae globi:occur:target:11484762-EOL_V2:281-ATE-ITIS:610007 ITIS:610007 Gymnoplea superorder       Maxillopoda Arthropoda Animalia
EOLrefute_globi:assoc:11484762-EOL_V2:281-ATE-ITIS:83677 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL_V2:281 Plantae kingdom Plantae ITIS:83677 Crustacea subphylum Animalia globi:assoc:11484762-EOL_V2:281-ATE-ITIS:83677 http://purl.obolibrary.org/obo/RO_0002470 @article{Vinogradov_1978, doi = {10.1007/bf00391640}, url = {https://doi.org/10.1007%2Fbf00391640}, year = 1978, publisher = {Springer Nature America, Inc}, volume = {48}, number = {4}, pages = {357--366}, author = {M. E. Vinogradov and E. A. Shushkina}, title = {Some development patterns of plankton communities in the upwelling areas of the Pacific Ocean}, journal = {Marine Biology}} 10.1007/bf00391640 https://doi.org/10.1007%2Fbf00391640 https://mangal.io - the ecological interaction database. globi:occur:source:11484762-EOL_V2:281-ATE EOL_V2:281 Plantae kingdom           Plantae globi:occur:target:11484762-EOL_V2:281-ATE-ITIS:83677 ITIS:83677 Crustacea subphylum         Arthropoda Animalia
EOLrefute_globi:assoc:11484762-EOL_V2:281-ATE-EOL:1489 https://en.wiktionary.org/wiki/refute refute EOL-GloBI-validation1 Records of non-carnivorous plants eating animals are likely to be errors http://purl.obolibrary.org/obo/RO_0002470 eats Biotic interaction data that failed Encyclopedia of Life data validation https://github.com/globalbioticinteractions/refuted-biotic-interactions-by-eol/blob/master/interactions.tsv EOL_V2:281 Plantae kingdom Plantae EOL:1489 Appendicularia class Animalia globi:assoc:11484762-EOL_V2:281-ATE-EOL:1489 http://purl.obolibrary.org/obo/RO_0002470 @article{Vinogradov_1978, doi = {10.1007/bf00391640}, url = {https://doi.org/10.1007%2Fbf00391640}, year = 1978, publisher = {Springer Nature America, Inc}, volume = {48}, number = {4}, pages = {357--366}, author = {M. E. Vinogradov and E. A. Shushkina}, title = {Some development patterns of plankton communities in the upwelling areas of the Pacific Ocean}, journal = {Marine Biology}} 10.1007/bf00391640 https://doi.org/10.1007%2Fbf00391640 https://mangal.io - the ecological interaction database. globi:occur:source:11484762-EOL_V2:281-ATE EOL_V2:281 Plantae kingdom           Plantae globi:occur:target:11484762-EOL_V2:281-ATE-EOL:1489 EOL:1489 Appendicularia class       Appendicularia Chordata Animalia
tpoisot commented 3 years ago

So the issue was that the "Fungal" group was classified as a virus - which is maybe a decision from the GBIF backbone. We need to dig into the dataset to see if changing the mapping of this node to - "Fungi" is correct. This doesn't seem too bad, and is not a case of a flipped interaction.

As I asked before, please open issues in the Mangal repo. Or as a suggestion, as GLOBI is consuming data, maybe you want to point users to the place where they should be opening issues, since the GLOBI team won't be fixing them, and since we won't be monitoring this repo for issues.

jhpoelen commented 3 years ago

@tpoisot much like your idea to make the endpoint for issues configurable. I agree that having folks contact curators of (aggregate) indexed dataset directly would likely be beneficial. See https://github.com/globalbioticinteractions/globalbioticinteractions/issues/661 .

re: the suspicious "Fungal" mapping - yes, this likely a name mapping issue. I've opened a separate issue for that at https://github.com/globalbioticinteractions/globi-taxon-names/issues/8 .

Please do note that other refutation records were noted, so there's refuted interaction records beyond those that involve the "Fungal" name.

tpoisot commented 3 years ago

Yes, im looking into these

tpoisot commented 3 years ago

As for "Fungal", it's probably "Fungal virus" with the " virus" part having been dropped at some point. It happens on some backone (we had to clean a lot of names because of that recently).

jhpoelen commented 3 years ago

Thanks @tpoisot for your note on the suspicious Fungal mappings. I've prepared a new release of the GloBI taxon graph 0.3.32 at https://zenodo.org/record/4753955 to remove this undesired mapping of names including "[Ff]ungal [Hh]yphae" and "Fungal spores". Changes should propagate over the next couple of days.

jhpoelen commented 3 years ago

It appears that the name mapping updates related to suspicious "Fungal Hyphae" and "Fungal spores" have propagated and no suspicious viral interactions appear in the indexed mangal interaction networks.

Also, the original suspicious interactions e.g., Plants eating Gammarus (an amphipod) https://www.globalbioticinteractions.org/?interactionType=interactsWith&sourceTaxon=Plantae&targetTaxon=Gammarus are no longer being indexed by GloBI in the mangal interaction networks.

While suspicious interactions remain (e.g., Green Algae (Chlorophyta) eating Gymnoplea (a copepod), and Chlorophyta eating Crustacea (see attached screenshot)), I am sure that @tpoisot et al. will curate their interaction networks as they see fit.

That said, I'd be happy to help facilitate reviewing interaction data when desired.

@ddkapan @tpoisot thanks for your efforts in carefully reviewing and curating interaction records.

Screenshot from 2021-05-17 11-49-55