campmlc
commented
3 years ago All of the MSB:Para references will be to the invertebrate collection, assuming the relationship is "same individual as". Is it possible to get a download of the Globi data showing both 1 "found unresolved reference [National Museum of Natural History 77651]" and the Arctos source guid url from MSB:Para? Or the MSB:Para catalog number? The file we have does not allow us to quickly find the referenced record.
On Thu, May 27, 2021 at 6:22 PM Jorrit Poelen @.***> wrote:
- [EXTERNAL]*
In a recent msb-para review we found unresolved occurrence id references like:
1 found unresolved reference [National Museum of Natural History 77651] 1 found unresolved reference [National Museum of Natural History 603447] 1 found unresolved reference [National Museum of Natural History 602540] 1 found unresolved reference [National Museum of Natural History 298475] 1 found unresolved reference [National Museum of Natural History 1392647] 1 found unresolved reference [National Museum of Natural History 1390579] 1 found unresolved reference [National Museum of Natural History 1390578] 1 found unresolved reference [National Museum of Natural History 1390577] 1 found unresolved reference [National Museum of Natural History 1376652] 1 found unresolved reference [National Museum of Natural History 1376651] 1 found unresolved reference [National Museum of Natural History 1375891] 1 found unresolved reference [National Museum of Natural History 1375890] 1 found unresolved reference [National Museum of Natural History 1375518] 1 found unresolved reference [National Museum of Natural History 1375517] 1 found unresolved reference [National Museum of Natural History 1375516] 1 found unresolved reference [National Museum of Natural History 1375515] 1 found unresolved reference [National Museum of Natural History 1375514] 1 found unresolved reference [National Museum of Natural History 1375391] 1 found unresolved reference [National Museum of Natural History 1375390] 1 found unresolved reference [National Museum of Natural History 1375389] 1 found unresolved reference [National Museum of Natural History 1375387] 1 found unresolved reference [National Museum of Natural History 1373126] 1 found unresolved reference [National Museum of Natural History 1373122] 1 found unresolved reference [National Museum of Natural History 1373121] 1 found unresolved reference [National Museum of Natural History 1373120] 1 found unresolved reference [National Museum of Natural History 1367425] 1 found unresolved reference [National Museum of Natural History 1348186]However, the USNM uses ark ids for their occurrence ids. Similar to #4 https://github.com/globalbioticinteractions/msb-para/issues/4, try to find way to infer a record reference used in Arctos like National Museum of Natural History 1392647.
Note, however, that when querying the "raw" dwca USNM record, two hits show up when searching for 1392647 - on in the botany collection, and the other in the invertebrate collection.
so, more criteria are needed to make an unambiguous link.
fyi @dustymc https://github.com/dustymc @campmlc https://github.com/campmlc
$ zipgrep -E "\t1392647\t" 60c10aea7c4dfdfd81e078541a271ceb379ab8605af819f90cd6882e8712d12e occurrence.txt:http://n2t.net/ark:/65665/3aeecedcb-1cc4-4936-8aae-eb3b2b555e46 PhysicalObject http://biocol.org/urn:lsid:biocol.org:col:34871 USNM Invertebrate Zoology NMNH Extant Biology PreservedSpecimen http://n2t.net/ark:/65665/3aeecedcb-1cc4-4936-8aae-eb3b2b555e46 1392647 Original USNPC preservative was a solution of 70% ethanol, 3% formalin, and 2% glycerine {"hostGen":"Erignathus","hostSpec":"barbatus","hostBodyLoc":"sm intestine","hostFldNo":"RLRausch-22610"} USNPC # 097644 R. Rausch & V. Rausch 1 Alcohol (Ethanol) 18 18 1959 1 18 North America, United States, Alaska North America United States Alaska Gambell (St. Lawrence Isl) 63.7797 -171.741 WGS84 Rausch, R. L. Diphyllobothrium cordatum Animalia, Platyhelminthes, Cestoda, Diphyllobothriidea, Diphyllobothriidae Animalia Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Diphyllobothrium cordatum (Leuckart) occurrence.txt:http://n2t.net/ark:/65665/3f7b0519b-4ff1-4160-b196-16fc72b83d60 PhysicalObject http://biocol.org/urn:lsid:biocol.org:col:34871 US Botany NMNH Extant Biology PreservedSpecimen http://n2t.net/ark:/65665/3f7b0519b-4ff1-4160-b196-16fc72b83d60 1392647 s.n. W. C. Cusick 1 14073988 188 North America, United States, Oregon North America United States Oregon Cusickiella douglasii Plantae, Dicotyledonae, Capparales, Brassicaceae Plantae Dicotyledonae Capparales BrassicaceaeCusickiella douglasii (A. Gray) Rollins
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jhpoelen
In a recent msb-para review we found unresolved occurrence id references like:
However, the USNM uses ark ids for their occurrence ids. Similar to #4, try to find way to infer a record reference used in Arctos like
National Museum of Natural History 1392647.Note, however, that when querying the "raw" dwca USNM record, two hits show up when searching for
1392647- on in the botany collection, and the other in the invertebrate collection.so, more criteria are needed to make an unambiguous link.
fyi @dustymc @campmlc