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globalbioticinteractions / name-alignment-template

align names with known taxonomic resources
https://big-bee-network.github.io/name-alignment-workshop
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column names misaligned #13

Closed jhpoelen closed 1 year ago

jhpoelen commented 1 year ago

In reviewing name report, it appears that the column headers appear to be misaligned with the data - data should be shifted 2 columns to the left.

jhpoelen commented 1 year ago

root cause of misaligned columns was that the output schema was expanded to include provenance info.

for fix, see https://github.com/globalbioticinteractions/globinizer/commit/a378839ed5b48a281cb92ef39ecf71094bbd99d4

@neilcobb @EMTuckerLab @CatChapman thanks for helping to find this issue with the name alignment output (see https://github.com/globalbioticinteractions/name-alignment-template) . I hope these recent changes have resolved the issue of the empty csv file and misaligned table headers. Note that the csv file is using ; (semi-colons) as separators in an attempt to side-step having to deal with commas in the data (e.g., authorship Linneaus, 1758)

jhpoelen commented 1 year ago

had to revert some of the changes. Re-opening issue, apologies for the delay.

jhpoelen commented 1 year ago

Re-applied fix after rollback.