Closed jhpoelen closed 1 year ago
$ preston cat --remote https://zenodo.org/record/7343032/files 'gz:https://zenodo.org/record/3833105/files/synonym_links.gz!/synonym_links' | grep 180050 946074|180050|08/27/2014
whereas,
$ preston cat --remote https://zenodo.org/record/7343032/files 'gz:https://zenodo.org/record/3833105/files/synonym_links.gz!/synonym_links' | grep -E "^51|50|" 51|50|03/02/2015
where 51 is a outdated name of 50
https://www.itis.gov/servlet/SingleRpt/SingleRpt?search_topic=TSN&search_value=51#null
https://www.itis.gov/servlet/SingleRpt/SingleRpt?search_topic=TSN&search_value=50#null
and from a recent 2022 version of itis -
$ cat synonym_links | grep 180050 180050|946074|04/26/2021
showing that Nomer is correctly parsing the synonym table, and suggests that ITIS reversed the synonymous relation between Mormoops blainvillei and Mormoops blainvillii in 2021.
or more specifically -
$ preston alias 'https://www.itis.gov/downloads/itisMSSql.zip'
https://www.itis.gov/downloads/itisMSSql.zip http://purl.org/pav/hasVersion hash://sha256/b56ab3c69cc2721150ac4683646aa2c79bcb1cc273c38a02f4fef5bdccbff185
$ preston cat 'zip:https://www.itis.gov/downloads/itisMSSql.zip!/itisMS.102822/synonym_links' | grep 180050 180050|946074|04/26/2021
with Nomer v0.4.6 , the ITIS makes the following claims:
echo -e "\tMormoops blainvillei" | nomer append itis --include-header
providedExternalId | providedName | relationName | resolvedExternalId | resolvedName | resolvedAuthorship | resolvedRank | resolvedCommonNames | resolvedPath | resolvedPathIds | resolvedPathNames | resolvedPathAuthorships | resolvedExternalUrl |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Mormoops blainvillei | HAS_ACCEPTED_NAME | ITIS:946074 | Mormoops blainvillei | Leach, 1821 | species | Animalia | Bilateria | Deuterostomia | Chordata | Vertebrata | Gnathostomata | Tetrapoda | Mammalia | Theria | Eutheria | Chiroptera | Yangochiroptera | Noctilionoidea | Mormoopidae | Mormoops | Mormoops blainvillei | ITIS:202423 | ITIS:914154 | ITIS:914156 | ITIS:158852 | ITIS:331030 | ITIS:914179 | ITIS:914181 | ITIS:179913 | ITIS:179916 | ITIS:179925 | ITIS:179985 | ITIS:945841 | ITIS:945843 | ITIS:180048 | ITIS:180049 | ITIS:946074 | kingdom | subkingdom | infrakingdom | phylum | subphylum | infraphylum | superclass | class | subclass | infraclass | order | suborder | superfamily | family | genus | species | http://www.itis.gov/servlet/SingleRpt/SingleRpt?search_topic=TSN&search_value=946074 |
echo -e "\tMormoops blainvillii" | nomer append itis --include-header
providedExternalId | providedName | relationName | resolvedExternalId | resolvedName | resolvedAuthorship | resolvedRank | resolvedCommonNames | resolvedPath | resolvedPathIds | resolvedPathNames | resolvedPathAuthorships | resolvedExternalUrl |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Mormoops blainvillii | SYNONYM_OF | ITIS:946074 | Mormoops blainvillei | Leach, 1821 | species | Animalia | Bilateria | Deuterostomia | Chordata | Vertebrata | Gnathostomata | Tetrapoda | Mammalia | Theria | Eutheria | Chiroptera | Yangochiroptera | Noctilionoidea | Mormoopidae | Mormoops | Mormoops blainvillei | ITIS:202423 | ITIS:914154 | ITIS:914156 | ITIS:158852 | ITIS:331030 | ITIS:914179 | ITIS:914181 | ITIS:179913 | ITIS:179916 | ITIS:179925 | ITIS:179985 | ITIS:945841 | ITIS:945843 | ITIS:180048 | ITIS:180049 | ITIS:946074 | kingdom | subkingdom | infrakingdom | phylum | subphylum | infraphylum | superclass | class | subclass | infraclass | order | suborder | superfamily | family | genus | species | http://www.itis.gov/servlet/SingleRpt/SingleRpt?search_topic=TSN&search_value=946074 |
fyi @ajacsherman
when:
however, https://www.itis.gov/servlet/SingleRpt/SingleRpt?search_topic=TSN&search_value=180050#null reports the opposite is true.