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glotaran / TIMP

TIMP is an R package for fitting superposition models that implements the partitioned variable projection algorithm. The package has been extensively applied to modeling spectroscopy and Fluorescence Lifetime Imaging Microscopy (FLIM) datasets. This is the git managed codebase of the r-forge TIMP project.
https://glotaran.github.io/TIMP/
GNU General Public License v2.0
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📚 Change URLs pointing to the website of JSS in package documentation #7

Closed jsnel closed 1 year ago

jsnel commented 2 years ago

An e-mail from JSS co-editor-in-chief pointing us at some old URLs pointing at JSS rather than using DOIs. See also this announcement

So e.g. change: http://www.jstatsoft.org/v18/i03/ to https://doi.org/10.18637/jss.v018.i03 Here's the full list of URLs needing change: https://github.com/glotaran/TIMP/search?q=jstatsoft.org

the Journal of Statistical Software (JSS, https://www.jstatsoft.org/) recently migrated to a new server and editorial system, resulting in a change of the URLs being used for publications. Hence we checked all CRAN packages using JSS URLs in the documentation or citation files etc. This includes some of your packages: TIMP.

In general we recommend to use DOIs instead of URLs to link to JSS publications. These use the following pattern for articles: 10.18637/jss.vXXX.iYY where XXX is the three-digit volume and YY the two-digit issue. (For code snippets a "cYY" instead of "iYY" is used.) The DOIs are also shown on the web pages of the JSS articles.

For including these in a package you typically use:

  • \doi{...} markup in .Rd files
  • in DESCRIPTION/Description fields
  • bibentry(..., doi = ...) in CITATION files (or citEntry)

We would recommend to change all JSS references in your package correspondingly (even if redirections for the URLs are still working). The corresponding files in the package are: TIMP/man/TIMP-package.Rd TIMP/man/TIMP-package.Rd TIMP/man/denS4.Rd TIMP/man/fitModel.Rd TIMP/inst/CITATION

Thanks for your consideration - and for referring to work published in JSS!

Best regards, Achim Zeileis (JSS co-editor-in-chief)