Bump scipy from 1.12.0 to 1.13.1

[dependabot[bot]]

Bumps scipy from 1.12.0 to 1.13.1.

Release notes

Sourced from scipy's releases.

SciPy 1.13.1 Release Notes

SciPy 1.13.1 is a bug-fix release with no new features compared to 1.13.0. The version of OpenBLAS shipped with the PyPI binaries has been increased to 0.3.27.

Authors

• Name (commits)
• h-vetinari (1)
• Jake Bowhay (2)
• Evgeni Burovski (6)
• Sean Cheah (2)
• Lucas Colley (2)
• DWesl (2)
• Ralf Gommers (7)
• Ben Greiner (1) +
• Matt Haberland (2)
• Gregory R. Lee (1)
• Philip Loche (1) +
• Sijo Valayakkad Manikandan (1) +
• Matti Picus (1)
• Tyler Reddy (62)
• Atsushi Sakai (1)
• Daniel Schmitz (2)
• Dan Schult (3)
• Scott Shambaugh (2)
• Edgar Andrés Margffoy Tuay (1)

A total of 19 people contributed to this release. People with a "+" by their names contributed a patch for the first time. This list of names is automatically generated, and may not be fully complete.

SciPy 1.13.0 Release Notes

SciPy 1.13.0 is the culmination of 3 months of hard work. This out-of-band release aims to support NumPy 2.0.0, and is backwards compatible to NumPy 1.22.4. The version of OpenBLAS used to build the PyPI wheels has been increased to 0.3.26.dev.

This release requires Python 3.9+ and NumPy 1.22.4 or greater.

For running on PyPy, PyPy3 6.0+ is required.

Highlights of this release

... (truncated)

Commits

• 44e4eba REL: SciPy 1.13.1 release commit [wheel build]
• 2eb8e1b Merge pull request #20632 from tylerjereddy/treddy_prep_1_13_1_backports
• 1a00d48 DOC: PR 20632 updates
• 11e99ba BUG: stats: Fix zipf.pmf and zipfian.pmf for int32 k (#20702) [wheel bu...
• 506cbeb MAINT: stats.wilcoxon: fix bug with Ndim>1, shape[axis]>50, NaN, 'auto' (#20592)
• c9d8613 CI, MAINT: PR 20632 revisions
• 95c50a4 MAINT: PR 20632 revisions [wheel build]
• e7abaf1 MAINT: PR 20632 revisions [wheel build]
• aa32933 CI: PR 20632 revisions [wheel build]
• 023b0fb CI: MR 20632 revisions
• Additional commits viewable in compare view

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[github-actions[bot]]

:point_left: Launch a binder notebook on branch glotaran/pyglotaran/dependabot/pip/scipy-1.13.1

[sonarcloud[bot]]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
No data about Coverage
No data about Duplication

See analysis details on SonarCloud

[github-actions[bot]]

Benchmark is done. Checkout the benchmark result page. Benchmark differences below 5% might be due to CI noise.

Benchmark diff v0.7.2 vs. main

``` All benchmarks: | Change | Before [1fb14bbc] | After [d1cd0bc0] | Ratio | Benchmark (Parameter) | |----------|------------------------------|---------------------|---------|-----------------------------------------| | | 236M | 239M | 1.01 | IntegrationTwoDatasets.peakmem_optimize | | | 1.55±0.06s | 1.42±0.04s | 0.91 | IntegrationTwoDatasets.time_optimize | ```

Benchmark diff main vs. PR

``` All benchmarks: | Change | Before [d1cd0bc0] | After [dd6ffe54] | Ratio | Benchmark (Parameter) | |----------|----------------------|---------------------|---------|-----------------------------------------| | | 239M | 237M | 0.99 | IntegrationTwoDatasets.peakmem_optimize | | | 1.42±0.04s | 1.40±0.1s | 0.99 | IntegrationTwoDatasets.time_optimize | ```

[dependabot[bot]]

OK, I won't notify you again about this release, but will get in touch when a new version is available. If you'd rather skip all updates until the next major or minor version, let me know by commenting @dependabot ignore this major version or @dependabot ignore this minor version. You can also ignore all major, minor, or patch releases for a dependency by adding an ignore condition with the desired update_types to your config file.

If you change your mind, just re-open this PR and I'll resolve any conflicts on it.