Refactor webapp backend - Githubissues

glycojones / privateer

The Swiss Army knife for carbohydrate structure validation, refinement and analysis

GNU Lesser General Public License v2.1

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Refactor webapp backend #88

Closed Dialpuri closed 5 months ago

Dialpuri commented 5 months ago

Summary

This PR refactors a large range of the Privateer Web App:

simplified backend binding code
fixed memory leaks with binding code
removed unnecessary state code
removed unnecessary graphs
formatted graphs consistently
removed unnecessary images
removed beta tag from database
added types to Torsion Plot

Testing

Since this PR contains changes to almost every aspect of the web app a full-scale test must be completed. This includes:

testing main page with loading a PDB file and PDB+MTZ file and fetching from PDB
testing database page with a few structures
testing stats page and stats downloads

@louholland and @lcs551 - can you test these changes whenever is convenient?

louholland commented 5 months ago

Testing main page:

Successfully uploaded pdb
Successfully uploaded pdb and mtg
Successfully fetched from pdb

Testing database:

Data on the structures I tested loaded successfully
Still seems to be highlighting conformation error in 6plh snfg

Testing stats page:

Plots look good and I can interact with them
Plots download successfully but inconsistent file type between them with the validation error plots downloading as svg but the glycosylation over time downloading as a png