glycojones / privateer

The Swiss Army knife for carbohydrate structure validation, refinement and analysis
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[Database] 4USO Issue #93

Open Dialpuri opened 6 months ago

Dialpuri commented 6 months ago

PDB ID 4USO

Database PDB

Describe the issue The fucose is detected as a beta-L-aldopyranose which is in correct as FUC is an alpha-L-aldopyranose.

A similar problem has also been found for the four structures containing SFU which is methyl 1-seleno-alpha-L-fucopyranoside (2WQ4, 4AGI, 5EO7 and 6YF6) . This problem is not observed for complexes with MFU alpha-methylfucoside. The anomer is not given in the 2D description whilst it is known.