glygener / glygen-issues

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Supersearch: check edge information - mainly directions. #1136

Open sujeetvkulkarni opened 7 months ago

sujeetvkulkarni commented 7 months ago

All snapshots are from beta.

1. Glycan node GlyTouCan Accession : G17689DH In my opinion Site to Disease and Protein to Disease links should be enabled.

Screenshot 2024-03-22 at 11 57 11 AM

2. Protein node UniProtKB Accession/ID : P14210-1 It looks fine to me. But should Enzyme to Glycan link be enabled?

Screenshot 2024-03-22 at 12 10 59 PM

3. Motif node Glycan Motif ID : GGM.000018 In my opinion Site to Disease and Protein to Disease links should be enabled.

Screenshot 2024-03-22 at 12 27 53 PM

4. Site node Glycosylation : true Looks fine.

Screenshot 2024-03-22 at 12 36 00 PM

5. Enzyme node UniProtKB Accession/ID : Q8VIB3-1 Looks fine.

Screenshot 2024-03-22 at 12 47 21 PM

6. Disease node Name : liver cancer In my opinion Protein to Glycan, Site to Glycan, Glycan to Motif links should be enabled.

Screenshot 2024-03-22 at 12 59 01 PM

7. Gene node Gene Name : St3gal6 Looks fine.

Screenshot 2024-03-22 at 1 20 35 PM

8. Organism node Name : Human Looks fine.

Screenshot 2024-03-22 at 1 22 38 PM

sujeetvkulkarni commented 7 months ago

@ReneRanzinger Please review above screenshots and comments.