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2.5 | Master List for Data Download #1193

Closed ubhuiyan closed 2 weeks ago

ubhuiyan commented 2 months ago
Resource Downloaded by Completed (Y/N) Notes Issue
Cellosaurus Karina Y
ChEBI Cyrus Y
MatrixDB Cyrus Y
Reactome Cyrus Y
Glyconnect Urnisha Y Processing change required + New species added
IPTMnet Urnisha Y
MCW O-GlcNAc Urnisha Y New species added
OMA Urnisha Y Processing change required + New species added
O-GlcNAcAtlas Urnisha Y Processing change required
Genomics England Kate Y
Genome Alliance Kate Y
MGI Kate Y
Mondo Kate Y
EBI Kate Y
NCBI RefSeq Kate Y
Disease Ontology Kate Y
Glycosyltransferase (Chicken) Urnisha/Kate Y
Glycohydrolase (Chicken) Urnisha/Kate Y

Proteoform Data Download Doc

Protein Data Download Doc

kmartinez834 commented 2 months ago

Perform download check once you've downloaded files you are responsible for.
Instructions here: Downloads check

rykahsay commented 1 month ago

@ubhuiyan @katewarner ... when should I expect these files:

compiled/chicken_protein_glycohydrolase.csv compiled/chicken_protein_glycosyltransferase.csv

katewarner commented 1 month ago

@rykahsay

I've added the files to the compiled folder: compiled/chicken_protein_glycohydrolase.csv compiled/chicken_protein_glycosyltransferase.csv

rykahsay commented 1 month ago

@ubhuiyan ... I think you need to close this ticket now