BCO creation & edits

[ReneRanzinger]

Create BCOs for all new datasets

Dependencies:

• 1450

• 1455

• 1479

• 1493

• 1494

• 1495

• 1467

• 1497

• 1498

• 1499

• 1496

• 1500

• 1501

[ubhuiyan]

Note for myself: Update oglcnac BCOs output files that end in "db".

[katewarner]

BCO ID	Dataset Name	Creator Name	Notes
GLY_001052	arabidopsis_protein_allsequences.fasta	Kate
GLY_001053	arabidopsis_protein_altnames.csv	Kate
GLY_001054	arabidopsis_protein_binary_interactions.csv	Kate
GLY_001055	arabidopsis_protein_canonicalsequences.fasta	Kate
GLY_001056	arabidopsis_protein_citations_uniprotkb.csv	Kate
GLY_001057	arabidopsis_protein_enzyme_annotation_uniprotkb.csv	Kate
GLY_001058	arabidopsis_protein_function_uniprotkb.csv	Kate
GLY_001059	arabidopsis_protein_genelocus.csv	Kate
GLY_001060	arabidopsis_protein_genenames_refseq.csv	Kate
GLY_001061	arabidopsis_protein_genenames_uniprotkb.csv	Kate
GLY_001062	arabidopsis_protein_glycosylation_motifs.csv	Kate
GLY_001064	arabidopsis_protein_go_annotation.csv	Kate
GLY_001065	arabidopsis_protein_info_refseq.csv	Kate
GLY_001066	arabidopsis_protein_info_uniprotkb.csv	Kate
GLY_001067	arabidopsis_protein_masterlist.csv	Kate
GLY_001068	arabidopsis_protein_ncbi_linkouts.csv	Kate
GLY_001070	arabidopsis_protein_participants_rhea.csv	Cyrus
GLY_001071	arabidopsis_protein_pro_annotation.csv	Cyrus	missing usability domain
GLY_001072	arabidopsis_protein_proteinnames_refseq.csv	Cyrus	usability domain depend on other BCOs
GLY_001073	arabidopsis_protein_ptm_annotation_uniprotkb.csv	Cyrus
GLY_001074	arabidopsis_protein_reactions_rhea.csv	Cyrus	missing usability domain
GLY_001075	arabidopsis_protein_recnames.csv	Cyrus
GLY_001076	arabidopsis_protein_sequenceinfo.csv	Cyrus
GLY_001077	arabidopsis_protein_signalp_annotation.csv	Cyrus
-	arabidopsis_protein_signalp_cleavedsequences.fasta
-	arabidopsis_protein_signalp_fullsequences.fasta
-	arabidopsis_protein_signalp_peptidesequences.fasta
GLY_001078	arabidopsis_protein_site_annotation_uniprotkb.csv	Cyrus
GLY_001079	arabidopsis_protein_submittednames.csv	Cyrus
GLY_001080	arabidopsis_protein_transcriptlocus.csv	Cyrus
GLY_001081	arabidopsis_protein_xref_brenda.csv	Cyrus
GLY_001082	arabidopsis_protein_xref_cazy.csv	Cyrus
GLY_001083	arabidopsis_protein_xref_cdd.csv	Cyrus
GLY_001084	arabidopsis_protein_xref_chembl.csv	Cyrus
GLY_001085	arabidopsis_protein_xref_geneid.csv	Luke
GLY_001086	arabidopsis_protein_xref_intact.csv	Luke
GLY_001087	arabidopsis_protein_xref_interpro.csv	Luke
GLY_001088	arabidopsis_protein_xref_kegg.csv	Luke
GLY_001089	arabidopsis_protein_xref_oma.csv	Luke
GLY_001090	arabidopsis_protein_xref_orthodb.csv	Luke
GLY_001091	arabidopsis_protein_xref_panther.csv	Luke
GLY_001093	arabidopsis_protein_xref_pdb.csv	Luke
GLY_001094	arabidopsis_protein_xref_pfam.csv	Luke
GLY_001095	arabidopsis_protein_xref_pro.csv	Luke
GLY_001096	arabidopsis_protein_xref_refseq.csv	Luke
GLY_001097	arabidopsis_protein_xref_rhea.csv	Luke
GLY_001098	arabidopsis_protein_xref_uniprotkb.csv	Luke
GLY_001099	arabidopsis_protein_glycohydrolase.csv	Luke
GLY_001092	arabidopsis_protein_glycosyltransferase.csv	Luke
arabidopsis_protein_xref_pride.csv	Kate
human_protein_xref_pride.csv	Kate
yeast_protein_xref_pride.csv	Kate
pig_protein_xref_pride.csv	Kate
mouse_protein_xref_pride.csv	Kate
rat_protein_xref_pride.csv	Kate
fruitfly_protein_xref_pride.csv	Kate
human_protein_xref_massive.csv	Kate
GLY_001063	human_protein_disease_alliance_genome.csv	Kate
GLY_001051	human_proteoform_glycosylation_sites_platelet_o_linked.csv	Kate	Not ready yet
protein_glygen_flybase_linkout.tsv	Kate