PMID: 36740532 Comprehensive analysis of platelet glycoprotein Ibα ectodomain glycosylation

[Mindyporterfield]

PlateletPaper

[Mindyporterfield]

• [x] Mindy- read paper, id data to be curated (which figures etc), draw an example structure paying attention to reducing end type (free or reduced) and modifications (permethylation). Write a ticket for Anh and link example structure.

• [x] Anh-Draw assigned structures using GRITS, export as gws file and put in the corresponding folder in sharepoint, comment in github to let me know its done.

• [ ] Mindy-check structures, give any needed feedback

Mindy -proceed with the rest of the curation workflow

• [ ] -convert structures (Sena) and get glytoucan ids

• [ ] -verify structures match glytoucan structure

• [ ] -Fill in remaining info for species, etc https://docs.google.com/document/d/1QPWU29l6pzo8bKIQ6epEidPDDxyp-5JQk9drhS-zJOg/edit#heading=h.urs6nll5b27n

• [ ] -deposit in sharepoint and comment on ticket

[Mindyporterfield]

Please draw Fig 4 O-glycans, panel A, B, C Fig 6 N-glycans panel A, B, C *only draw cartoons when cartoons are present, if there s just a mass number, draw the composition using gnome on Glygen web site (let me know if you don't remember this)

[apnguyen98]

I might need help with a refresher on how to draw the ones with only the mass. Will you have some time tomorrow or next week?

[Mindyporterfield]

Let try for next week I’m deep in internship applications Mindy

On Jan 31, 2024, at 4:14 PM, Anh P. Nguyen @.***> wrote:

 [EXTERNAL SENDER - PROCEED CAUTIOUSLY]

I might need help with a refresher on how to draw the ones with only the mass. Will you have some time tomorrow or next week?

— Reply to this email directly, view it on GitHubhttps://github.com/glygener/glygen-issues/issues/391#issuecomment-1919980152, or unsubscribehttps://github.com/notifications/unsubscribe-auth/A5GO7AQB6P2XXTOF2SVWDULYRKX47AVCNFSM6AAAAAAYVR4CYGVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTSMJZHE4DAMJVGI. You are receiving this because you were assigned.Message ID: @.***>

[apnguyen98]

Please find the gws files for this paper in the following link: https://gwu0.sharepoint.com/sites/GlyGenTeam-GRP/Shared%20Documents/Forms/AllItems.aspx?csf=1&web=1&e=EACW7c&cid=aba533af%2Dff65%2D4b17%2D8c9a%2D5c21f48836db&FolderCTID=0x01200081407FA815A7124E846BD764353D93CC&id=%2Fsites%2FGlyGenTeam%2DGRP%2FShared%20Documents%2FPaper%20Curation%2FPMID%C2%A036740532%20platelet%2FGWS&viewid=6ffb8fed%2D81e7%2D4af7%2Dbfcd%2Da6f29c268132