ReneRanzinger
commented
11 months ago On tst, I am adding it as shown below:
Open ReneRanzinger opened 1 year ago
ReneRanzinger
commented
11 months ago On tst, I am adding it as shown below:
ReneRanzinger
commented
11 months ago The integers in red are indexes in the "typelist" list (0 corresponds to "proteins", 1 corresponds to "enzymes" ...). Now, what you have is:
"10116_0": 22870 --> proteins in organism 10116
"10116_2": 2680 --> glycoproteins in organism 10116
"10116_0|2": 2680 --> glycoproteins out of 10116_0 (which is 22870)Tatiana wanted it this was so that she can keep breaking down the numbers in hierarchical categories.
...
"byproteintype": {
"typelist": [
"proteins",
"enzymes",
"glycoproteins"
],
"10116_0": 22870,
"7227_0": 13821,
"7227_2": 781,
"7227_0|2": 781,
"10116_2": 2680,
"10116_0|2": 2680,Sorry about that. The red colored integers are indexes in the "taxidlist" list.
"1": 7713, means 7713 glycans in taxid=10090
"2": 5282, means 5282 glycans in taxid=10116
"1|2": 3556, means 3556 glycans in taxid=10090 and taxid=10116"glycan": {
"taxidlist": [
"9823",
"10090",
"10116",
"10114",
"9606",
"7227",
"2697049",
"4932",
"9825",
"11103",
"44689",
"694009",
"63746"
],
"0": 5483,
"1": 7713,
"2": 5282,
"3": 4564,
"4": 21229,
"5": 897,
"6": 1241,
"7": 1121,
"8": 80,
"9": 35,
"10": 48,
"11": 21,
"12": 14,
"1|2": 3556,
"1|3": 2625,
"2|3": 1860,
"1|2|3": 1604,
"1|4": 6720,
"2|4": 5127,
"1|2|4": 4217,
"1|5": 870,
"2|5": 767,
"1|2|5": 821,
"4|5": 1081,
"1|4|5": 1127,
"2|4|5": 997,
"1|2|4|5": 1138,
"1|6": 1145,
"2|6": 1120,
"1|2|6": 1170,
"4|6": 1617,
"1|4|6": 1585,
Blocker for:
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