Open ReneRanzinger opened 1 year ago
[x] Mindy- read paper, id data to be curated (which figures etc), draw an example structure paying attention to reducing end type (free or reduced) and modifications (permethylation). Write a ticket for Anh and link example structure.
[x] Mindy-Draw assigned structures using GRITS, export as gws file and put in the corresponding folder in sharepoint, comment in github to let me know its done.
[ ] Mindy-check structures, give any needed feedback
[ ] Mindy -proceed with the rest of the curation workflow
[ ] -convert structures (Sena) and get glytoucan ids
[ ] verify structures match glytoucan structure
[ ] -Fill in remaining info for species, etc https://docs.google.com/document/d/1QPWU29l6pzo8bKIQ6epEidPDDxyp-5JQk9drhS-zJOg/edit#heading=h.urs6nll5b27n
[ ] -deposit in sharepoint and comment on ticket
@senaarpinar please convert gws files, sorry wrong ticket
@ReneRanzinger PanCanExcels are complete, each file has a tab named Glygen-final
PanCancer-148-paper