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gmao-cda / cycle-oletkf

controlling scripts for doing cycling DA with GEOS
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create flow.cylc #21

Closed gmao-cda closed 1 year ago

gmao-cda commented 1 year ago

under cpld_odas

gmao-cda commented 1 year ago

Screen Shot 2023-07-10 at 1 20 15 AM

gmao-cda commented 1 year ago

Run a whole cycle

./create_empty_exp_directory.py /discover/nobackup/cda/projects2/odas --members 2 --startDate 2017010100
gmao-cda commented 1 year ago 
./prep_init_ensemble_from_restarts.py --members 2 --startDate 2017010100 --cfgFile oletkf_config.yaml /discover/nobackup/cda/projects2/odas --dryRun
gmao-cda commented 1 year ago 
./gcm_run_lib_5deg_v2.py /discover/nobackup/cda/projects2/tmp/20170101T00_fcst0002 \
--flowDir /discover/nobackup/cda/develop_space/cycle-oletkf \
--geosDir /gpfsm/dnb06/projects/p179/cda/GEOSgcm_08Nov2022/install \
--site NCCS \
--ncpus 40 \
--ncpusPerNode 40 \
--bkgdSaveDir /discover/nobackup/cda/projects2/odas/bkgd/0002/20170101T06
gmao-cda commented 1 year ago 
./run_obsop.py /discover/nobackup/cda/projects2/tmp/test_obsop_5deg_py \
--obsopExec /discover/nobackup/cda/develop_space/develop_ocean_letkf/Ocean-LETKF-v5/cbuild_esma/src/OCN.obsOp_mom6.sss.x \
--rstFile  /discover/nobackup/cda/projects2/tmp/20170101T00_fcst0002/scratch/RESTART/MOM.res.nc \
--staticFile /discover/nobackup/cda/projects2/tmp/20170101T00_fcst0002/scratch/ocean_static.nc \
--topoFile  /discover/nobackup/cda/projects2/tmp/20170101T00_fcst0002/scratch/INPUT/ocean_topog_Edited.nc \
--nml   /discover/nobackup/cda/develop_space/cycle-oletkf/cylc/cpld_odas/etc/input.nml.5deg \
--bkgdFile  /discover/nobackup/cda/projects2/tmp/20170101T00_fcst0002/scratch/ocean_hourly_2017_01_01_06.nc \
--obsFile   /discover/nobackup/cda/projects2/tmp/test_obsop_5deg/SMAP_L2B_SSS_36950_20220101T005200_R18240_V5.0.h5 \
--hxFile   /discover/nobackup/cda/projects2/tmp/test_obsop_5deg_py/hx_sss.dat \
--otherArgs "-olevel 2"
gmao-cda commented 1 year ago 
./create_empty_exp_directory.py /discover/nobackup/cda/projects2/odas3 --members 3 --startDate 2017010100
./prep_init_ensemble_from_restarts.py --members 3 --startDate 2017010100 --cfgFile oletkf_config.yaml /discover/nobackup/cda/projects2/odas3
gmao-cda commented 1 year ago

example_LETKF:/discover/nobackup/cda/develop_space/develop_ocean_letkf/test_letkf_2steps/exp_20mem/letkf_4mem_test

gmao-cda commented 1 year ago 

mkdir -p /discover/nobackup/cda/projects2/odas3/obs/20170101T06
mkdir -p /discover/nobackup/cda/projects2/odas3/obs/20170101T12
cp /discover/nobackup/cda/projects2/obs/SMAP_L2B_SSS_36950_20220101T005200_R18240_V5.0.h5 /discover/nobackup/cda/projects2/odas3/obs/20170101T00/20170101T00.sss.h5
cp /discover/nobackup/cda/projects2/obs/SMAP_L2B_SSS_36950_20220101T005200_R18240_V5.0.h5 /discover/nobackup/cda/projects2/odas3/obs/20170101T06/20170101T06.sss.h5
cp /discover/nobackup/cda/projects2/obs/SMAP_L2B_SSS_36950_20220101T005200_R18240_V5.0.h5 /discover/nobackup/cda/projects2/odas3/obs/20170101T12/20170101T12.sss.h5