Jellyfish count runs very slowly on Apple M1 processor

gmarcais / Jellyfish

A fast multi-threaded k-mer counter

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Jellyfish count runs very slowly on Apple M1 processor #175

Open SachinDavis opened 3 years ago

SachinDavis commented 3 years ago

Compared to my computer with an x86 Intel CPU, Jellyfish count takes over 100x longer to run on my machine with an Apple M1

gmarcais commented 3 years ago

I unfortunately do not have access such hardware. There is a project to optimize for ARM+NEON using the ARM machine available on AWS. Hopefully that will also fix the problem with Apple M1.