gmarcais / Jellyfish

A fast multi-threaded k-mer counter
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Can the query subroutine support a large number of k-mer inputs simultaneously? #207

Open caixu0518 opened 2 months ago

caixu0518 commented 2 months ago

Hi, jellyfish

Can the query subroutine support a large number of k-mer inputs simultaneously? I have a file containing many k-mer sequences, and I want to quickly query these k-mers using the query subroutine. However, if I provide more than 50,000 k-mers at once, the program fails. I would like to know if there is a solution to this problem.

Best, Xu