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gmarcais / Jellyfish

A fast multi-threaded k-mer counter
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I only want to output k-mers found exactly once. Possible? #56

Closed endrebak closed 8 years ago

endrebak commented 8 years ago

Or do I need to parse the output afterwards?

endrebak commented 8 years ago

I asked this without access to a computer. Was not documented anywhere but in the CLI:

 -U, --upper-count=uint64                 Don't output k-mer with count > upper-count
gmarcais commented 8 years ago

Glad you found your answer.