gmbecker / genbankr

http://bioconductor.org/packages/devel/bioc/html/genbankr.html
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Will genebankr be maintained in future? At the moment is listed as deprecated and 'will probably be removed from Bioconductor' #25

Open ChristianRohde opened 1 year ago

ChristianRohde commented 1 year ago

Hi,

I came across this package which potentially could be very useful for a new project. When I look your page on Bioconductor I am not sure if it makes sense to invest time to learn how to use your package:

Screenshot 2023-11-03 at 09 59 32

Will you solve this issue and further maintain the software?

Best, Christian

stephenturner commented 10 months ago

Interested in the answer to this one as well.

nvelden commented 10 months ago

Same

gmbecker commented 10 months ago

Hi All,

Apologies for being non-responsive on this.

I will look into getting genbankr back into bioc for the april release, though I haven't worked through what is broken just yet.

Will keep you apprised.

On Sun, Jan 14, 2024 at 11:30 AM nvelden @.***> wrote:

Same

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SBUJordi commented 6 months ago

Hi, Quickly wanted to ask if you are still planning to fix the issue or if there are any news? Asking because it seems that genbankr has now been removed instead of being brought back.

2024-05-02 19 18 58
famulare commented 4 months ago

Anyone know any alternatives? I respect calling it quits on maintaining an open source project, but now a slow-burning project of mine is broken.

nvelden commented 4 months ago

I wrote a function to parse and load GenBank files in R. It is part of the geneviewer package. Maybe you could use it?