gmteunisse
commented
2 months ago Hello, can you please provide your session info? I think you are using microbiome::top_taxa rather than fantaxtic::top_taxa.
PS I answered your other issue, but never heard back from you. By the sound of it, your other issue has been resolved - please let me know if the provided solution resolved your issue, and if so, close the issue.
From: momodiame21 @.> Sent: Tuesday, April 30, 2024 11:05:03 AM To: gmteunisse/fantaxtic @.> Cc: Subscribed @.***> Subject: [gmteunisse/fantaxtic] n_taxa = is not working for me (Issue #31)
The n_taxa option does not work for me. Please see below. Also the tax_level = "" option doesnt work. It brings this error unused arguments (n_taxa = 10, tax_level = "Species")
top_asv <- top_taxa(GlobalPatterns, n_taxa = 10) Error in top_taxa(GlobalPatterns, n_taxa = 10) : unused argument (n_taxa = 10) top_asv <- top_taxa(GlobalPatterns)
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momodiame21
The n_taxa option does not work for me. Please see below. Also the tax_level = "" option doesnt work. It brings this error unused arguments (n_taxa = 10, tax_level = "Species")