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gnn4dr / DRKG

A knowledge graph and a set of tools for drug repurposing
Apache License 2.0
565 stars 153 forks source link

how to use it #27

Open sailseem opened 2 years ago

sailseem commented 2 years ago

can you show some examples by using this model to predict some drugs on certain diseases？what's the input？ thanks a lot

mufeili commented 2 years ago

Have you checked the "Notebooks for analyzing DRKG" in README?

sailseem commented 2 years ago

Yes, well, what i meant is that the input. If I understand this right, so I can input any disease symptom, genes, pathways, biological pathways as long as it exists in the data-source of DRKG. Besides, I should input the drug candidate lists, and the output will be the score, which is minus, more close to 0, will be the better choice, am i right? Thank you very much

mufeili commented 2 years ago

Yes, well, what i meant is that the input. If I understand this right, so I can input any disease symptom, genes, pathways, biological pathways as long as it exists in the data-source of DRKG. Besides, I should input the drug candidate lists, and the output will be the score, which is minus, more close to 0, will be the better choice, am i right? Thank you very much

@classicsong Can you take a look?