GGD recipe review is required to merge a pull-request (PR). Once your PR is passing tests on CircleCI and is ready to be merged, add the `please review & merge` label to the PR. NOTE: If you are NOT a member of the gogetdata project (meaning that you can't add this label), add a comment requesting that the label be added.
* [x] I have read the [guidelines for ggd data recipes](https://gogetdata.github.io/contribute.html).
* [ ] This PR is for a new data recipe.
* [x] This data recipe **is directly relevant to the biological sciences**.
* [x] This PR updates an existing recipe.
* [ ] This PR does something else (explain below).
## I'm submitting a new recipe for species:
**Genome build for the recipe is:**
GRCh38, GRCh37, hg38, hg19
## Description of the data and what processing is going on
GENCODE Canonical transcripts.
Duplicated genes from GENCODE annotations such as `nonsense_mediated_decay` and `readthrough_transcript` are removed.
**File type(s):**
gtf
**Data files containe a header:**
… by NMD and readthrough transcript annotations
GGD recipe review is required to merge a pull-request (PR). Once your PR is passing tests on CircleCI and is ready to be merged, add the `please review & merge` label to the PR. NOTE: If you are NOT a member of the gogetdata project (meaning that you can't add this label), add a comment requesting that the label be added. * [x] I have read the [guidelines for ggd data recipes](https://gogetdata.github.io/contribute.html). * [ ] This PR is for a new data recipe. * [x] This data recipe **is directly relevant to the biological sciences**. * [x] This PR updates an existing recipe. * [ ] This PR does something else (explain below). ## I'm submitting a new recipe for species: **Genome build for the recipe is:** GRCh38, GRCh37, hg38, hg19 ## Description of the data and what processing is going on GENCODE Canonical transcripts. Duplicated genes from GENCODE annotations such as `nonsense_mediated_decay` and `readthrough_transcript` are removed. **File type(s):** gtf **Data files containe a header:**