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gongx030 / ensemblemerge

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Supporting diffusion pseudotime for dimension reduction #54

Open gongx030 opened 2 years ago

gongx030 commented 2 years ago

Paper: https://www.nature.com/articles/nmeth.3971 R package: https://bioconductor.org/packages/release/bioc/html/destiny.html

@dsouz072 Please add this to current EnsembleMerge package (set up a pull request and let us review). One thing to note is that this method should also work for the latent representations produced by de novo or reference-based dimension reduction

dsouz072 commented 2 years ago

Use the latent representation from different methods as an input for the diffusion map.