goodcouscous / NanoPlot---maxlength-command-not-found

Hello, i am trying to use NanoPlot to filter Nanopore reads, create plots and create a summaryfile.
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NanoPlot --maxlength: command not found #1

Closed goodcouscous closed 5 months ago

goodcouscous commented 5 months ago

Hello, i am trying to use NanoPlot on fastq files created from Nanopore reads to filter the reads, create plots and create a summary file. But i get the error: --maxlength: command not found What can i do? This is the code: NanoPlot --fastq 860.fastq --maxlength 900 \ --minlength 890 \ --N50 \ --minqual 7 \ --format png \ --outdir NanoPlot_stuff

goodcouscous commented 5 months ago

ok i figuered it out. there was a \ missing after 860.fastq