Hello, i am trying to use NanoPlot on fastq files created from Nanopore reads to filter the reads, create plots and create a summary file.
But i get the error: --maxlength: command not found
What can i do? This is the code:
NanoPlot --fastq 860.fastq --maxlength 900 \ --minlength 890 \ --N50 \ --minqual 7 \ --format png \ --outdir NanoPlot_stuff
Hello, i am trying to use NanoPlot on fastq files created from Nanopore reads to filter the reads, create plots and create a summary file. But i get the error: --maxlength: command not found What can i do? This is the code:
NanoPlot --fastq 860.fastq --maxlength 900 \ --minlength 890 \ --N50 \ --minqual 7 \ --format png \ --outdir NanoPlot_stuff