google-code-export / nmrrestrntsgrid

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FC couldn't figure out simple mapping #105

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago
 The initial run of FC wrote this in the log and converted nothing

  Warning: Did not map CCPN chain codes ['A']
  Warning: Did not map resonance chain codes [' ']
  Final mapping: []
Warning: No chain selected... aborting linkResonances

guesslink suggested this mapping  [['A', ' ', 1, 0]]

It seems like the FC should have been able to handle that.

Original issue reported on code.google.com by schulte....@gmail.com on 14 Aug 2008 at 7:24

GoogleCodeExporter commented 9 years ago
Fixed - see issue 102.

Original comment by wfvran...@gmail.com on 19 Aug 2008 at 11:38

GoogleCodeExporter commented 9 years ago
This still seems to be a problem with multiple chains.

from link...log
  Warning: Did not map CCPN chain codes ['A', 'B']
  Warning: Did not map resonance chain codes ['A', 'B']
  Final mapping: []
Warning: No chain selected... aborting linkResonances

The fix:
     'forceChainMappings': [ ['A', 'A', 1, 0], ['B', 'B', 1, 0] ],

Original comment by schulte....@gmail.com on 21 Aug 2008 at 7:56

GoogleCodeExporter commented 9 years ago
Chris, do you recall what the original "final mapping" was?
It mapped like half the restraints initially right? 
Multimers are allways going to be difficult and require some help.
Do you mind if we close the issue? Wim has a lot on his plate too.

Original comment by jurge...@gmail.com on 21 Aug 2008 at 8:15

GoogleCodeExporter commented 9 years ago
There was no original mapping. Absolutely no conversions. 

We can close this,  but annotators should be aware when the see, "No chain 
selected...," that the first thing to try 
is probably the simplest.

Original comment by schulte....@gmail.com on 21 Aug 2008 at 8:41

GoogleCodeExporter commented 9 years ago
Issue 4 has been merged into this issue.

Original comment by jurge...@gmail.com on 15 Jan 2009 at 12:27