Data synchronization

[GoogleCodeExporter]

I tried to run mrannotator and found that there were no new data to be 
annotated.

Found   4401 entries in dir 
/dumpzone/pdb/pdb/data/structures/divided/nmr_restraints
Found      0 entries in dir /dumpzone/pdb/mr_anno_progress_nrg31
Found   4401 entries in database
Found   4319 entries in wwPDB dir /big/docr/NRG/wwPDB

In fact, it looks like 82 entries are missing.

The status logs showed that there should be 11 new entries:

2k0p  
2k1d  
2k7r  
2k8f  
2ke0  
2ke4  
2roe  
2rog  
2rol  
2rou  
2jzi  modified 

Original issue reported on code.google.com by schulte....@gmail.com on 4 Mar 2009 at 3:20

[GoogleCodeExporter]

Let me check if it got corrupted with the new mmCIFs...

Original comment by jurge...@gmail.com on 4 Mar 2009 at 3:28

• Changed state: Started

[GoogleCodeExporter]

The sync was just late again. They're in now.
Opened sql connection:Wattos.Episode_II.SQL_Episode_II@6f34a7d8
Found   4411 entries in dir 
/dumpzone/pdb/pdb/data/structures/divided/nmr_restraints
Found      0 entries in dir /dumpzone/pdb/mr_anno_progress_nrg31
Found   4401 entries in database
Found   4319 entries in wwPDB dir /big/docr/NRG/wwPDB
No annotated     entries obsolete now
No 'in progress' entries obsolete now
No wwPDB entries obsolete now
Entries in progress:             [0]
Entries to start anew:           [10]

Except for the wwPDB entries. Are you going to do them on grunt? They must not 
be populated for those 82 
entries. Possible if our software fails on them too. Most likely the NRG 
software processDOCR_FRED.csh in the 
step doOrganizeForGrid was not done/failed. Could you try to redo the missing 
ones? Are new ones properly 
inserted?

Original comment by jurge...@gmail.com on 5 Mar 2009 at 9:02

[GoogleCodeExporter]

Right now, I'm annotating on tang and doing an rsync to grunt. This is because 
we want to keep the NRG going, 
and we don't have wattos actually writing out the joinedCoord.str on grunt. 
Eventually, we will get everything 
running on grunt, but at the moment, we have other projects and issues to deal 
with. 

Original comment by schulte....@gmail.com on 5 Mar 2009 at 2:06

[GoogleCodeExporter]

Can we close this one?

Original comment by jurge...@gmail.com on 31 Mar 2009 at 8:51

• Changed state: Fixed

[GoogleCodeExporter]

yes. please

Original comment by schulte....@gmail.com on 31 Mar 2009 at 1:20

• Changed state: Verified