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Clean command doesn't function as it should #9

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago 
What steps will reproduce the problem?
1. Run -clean command with any frequence
2.
3.

What is the expected output? What do you see instead?
Either an empty output file or no output.

What version of the product are you using? On what operating system?
latest. Mac OS 10.5

Please provide any additional information below.
This happens with either a fasta or nexus input file.  The file has only 6 
taxa, but over 200,000 bp.

Original issue reported on code.google.com by Dan.Fulo...@gmail.com on 27 Sep 2010 at 4:58

Attachments:

GoogleCodeExporter commented 9 years ago 
This is a result of having too strict of a clean command.

Original comment by blackrim on 29 Jan 2012 at 11:27