It would be useful to be able to configure mutually exclusive options.
Currently these are setup as optional parameters, so if they're mandatory they
could be missed, or user may select both.
This is more of a problem with options that take a value, as flags can be added
to a dropdown box (bowtie quality scale).
NB: To complicate matters there is at least one example (bowtie) of more
complicated combinations: <one_file> | -1 <file_one> -2 <file_two>
NB2: Other types of inter-paramter relationships too, ie -a_file option only
possible if -A is defined.
Original issue reported on code.google.com by s.willi...@qfab.org on 19 Aug 2011 at 4:21
Original issue reported on code.google.com by
s.willi...@qfab.org
on 19 Aug 2011 at 4:21