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google-deepmind / alphafold

Open source code for AlphaFold.
Apache License 2.0
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AlphaFold Colab: Minimisation failed after 100 runs - disable amber relax - prediction does not download #555

Closed sw249 closed 2 years ago

sw249 commented 2 years ago

I have had this issue for a while now using AlphaFold Colab (for some reason not AlphaFold2 Colab though) where I try and run a prediction, it tells me minimisation has failed after 100 runs which leads me to disable run relax and then it creates the prediction but doesn't download it (I am connected to a custom GCE VM) Anyone got any ideas about what the issue might be?

Htomlinson14 commented 2 years ago

Thanks for raising this! This duplicates https://github.com/deepmind/alphafold/issues/483 and https://github.com/deepmind/alphafold/issues/383 so closing this issue.