Despite specifying --max_template_date=2022-12-31, I encounter an issue where the template search process stops due to the absence of recent PDB files.
Is there a solution to this problem?
And is there a way to skip the template search step if the required PDBs are not found in the downloaded database?
Thank you
I'm currently practicing using AlphaFold Multimer with the following command:
python3 docker/run_docker.py --fasta_paths=Multimer.fasta --max_template_date=2022-12-31 --data_dir=/data0/db/AFDB/ --model_preset=multimer --output_dir=/home/test/multimer/result
Despite specifying --max_template_date=2022-12-31, I encounter an issue where the template search process stops due to the absence of recent PDB files.
Is there a solution to this problem? And is there a way to skip the template search step if the required PDBs are not found in the downloaded database? Thank you