Can I use a custom PDB file for multimer prediction

google-deepmind / alphafold

Open source code for AlphaFold.

Apache License 2.0

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Can I use a custom PDB file for multimer prediction #932

Open hopanoid opened 5 months ago

hopanoid commented 5 months ago

I want to predict a trimer of proteins A, B, and C. I have several conformations of A and want to use them as templates. Can I use a PDB file as an input for A, forcing AlphaFold multimer to consider only the supplied structures of A for the multimer complex?