Downloaded cif file from open access doesn't have secondary structure assignments

google-deepmind / alphafold

Open source code for AlphaFold.

Apache License 2.0

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Downloaded cif file from open access doesn't have secondary structure assignments #936

Closed jiangandrew closed 1 month ago

jiangandrew commented 1 month ago

Model 0 (fold_2024_05_13_11_18_model_0.cif) appears to be a protein without secondary structure assignments." KeyError: 'pdbx_description'
File '/Applications/Chimera.app/Contents/Resources/share/chimera/Sequence.py", line 993 in getSequences description = entity[index]['pdbx_description']

e-pettersen commented 1 month ago

This was fixed in Chimera at the end of last week. You have to use a daily build to get the fix.

jiangandrew commented 1 month ago

It works with the newest daily build. Thank you so much for your help!