[Feature Request] Introducing AFusion: A GUI for AlphaFold 3

[Hanziwww]

Dear AlphaFold Team,

Firstly, thank you for your groundbreaking work with AlphaFold 3. The advancements you've made in biological structure prediction are truly inspiring.

I am writing to introduce AFusion, a graphical user interface (GUI) I've developed to enhance the user experience of running AlphaFold 3 predictions. AFusion is designed to simplify the process of generating input JSON files and executing predictions, making AlphaFold more accessible to users who prefer a GUI over command-line interactions.

Screenshots:

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Repository Link:

The source code and documentation for AFusion are available on GitHub.

Request:

I believe that AFusion can be a valuable tool for the AlphaFold user community. I kindly request that you consider:

• Sharing AFusion with the community by mentioning it in your README or documentation.
• Providing feedback or suggestions for improvements.

Thank you for your time and consideration.

Best regards,

Hanziwww

[Augustin-Zidek]

Great work! It is exciting to see people building things on top of AlphaFold 3.

I will point people your way when they ask for AlphaFold GUI. :)

[Hanziwww]

Thanks a lot. :) Here is a demo site for generate input JSON files easily.

[Augustin-Zidek]

Just a quick note that @jacobjinkelly added a new flag --buckets in https://github.com/google-deepmind/alphafold3/commit/2ffe43f574436e6473bf3ab1c0c61c040edc59fd which would be worth integrating in your app.

[Hanziwww]

Just a quick note that @jacobjinkelly added a new flag --buckets in 2ffe43f which would be worth integrating in your app.

New version updated which supports flag --buckets.