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google / fhir-examples

Usage Examples for github.com/google/fhir
Apache License 2.0
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Issue building: No matching distribution found for fhir_bazel_pip_dependencies #7

Open Lewis-E opened 4 years ago

Lewis-E commented 4 years ago

Example error below:


~/bin/generate_definitions_and_protos.sh //proto/myprofile:myprofile
INFO: Repository fhir_bazel_pip_dependencies instantiated at:
  no stack (--record_rule_instantiation_callstack not enabled)
Repository rule pip_import defined at:
  /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/rules_python/python/pip.bzl:51:29: in <toplevel>
ERROR: An error occurred during the fetch of repository 'fhir_bazel_pip_dependencies':
   pip_import failed: Collecting apache_beam>=2.14.0 (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/17/92/1975c3f3a880f409b1b06a600f9afab8569c9f1d65e2db56336dc0bae6a6/apache_beam-2.23.0-cp38-cp38-macosx_10_9_x86_64.whl
  Saved ./apache_beam-2.23.0-cp38-cp38-macosx_10_9_x86_64.whl
Collecting funcsigs (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 2))
  Using cached https://files.pythonhosted.org/packages/69/cb/f5be453359271714c01b9bd06126eaf2e368f1fddfff30818754b5ac2328/funcsigs-1.0.2-py2.py3-none-any.whl
  Saved ./funcsigs-1.0.2-py2.py3-none-any.whl
Collecting google-cloud-bigquery (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 3))
  Using cached https://files.pythonhosted.org/packages/41/2c/e4da0278a5fd8e71710cfded98c13a5ed2ecb66c704fc4feb3734e8c027d/google_cloud_bigquery-1.27.2-py2.py3-none-any.whl
  Saved ./google_cloud_bigquery-1.27.2-py2.py3-none-any.whl
Collecting nose>=1.3.7 (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 4))
  Using cached https://files.pythonhosted.org/packages/15/d8/dd071918c040f50fa1cf80da16423af51ff8ce4a0f2399b7bf8de45ac3d9/nose-1.3.7-py3-none-any.whl
  Saved ./nose-1.3.7-py3-none-any.whl
Collecting protobuf (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 5))
  Using cached https://files.pythonhosted.org/packages/eb/79/feb55f5a6c8bd48d79beeb80c11299eb0d378c6df8ca0f33f91d8eda637b/protobuf-3.13.0-cp38-cp38-macosx_10_9_x86_64.whl
  Saved ./protobuf-3.13.0-cp38-cp38-macosx_10_9_x86_64.whl
Collecting python-dateutil>=2.8.1 (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/d4/70/d60450c3dd48ef87586924207ae8907090de0b306af2bce5d134d78615cb/python_dateutil-2.8.1-py2.py3-none-any.whl
  Saved ./python_dateutil-2.8.1-py2.py3-none-any.whl
Collecting request (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 7))
 (  Could not find a version that satisfies the requirement request (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 7)) (from versions: )
No matching distribution found for request (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 7))
)
ERROR: no such package '@fhir_bazel_pip_dependencies//': pip_import failed: Collecting apache_beam>=2.14.0 (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/17/92/1975c3f3a880f409b1b06a600f9afab8569c9f1d65e2db56336dc0bae6a6/apache_beam-2.23.0-cp38-cp38-macosx_10_9_x86_64.whl
  Saved ./apache_beam-2.23.0-cp38-cp38-macosx_10_9_x86_64.whl
Collecting funcsigs (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 2))
  Using cached https://files.pythonhosted.org/packages/69/cb/f5be453359271714c01b9bd06126eaf2e368f1fddfff30818754b5ac2328/funcsigs-1.0.2-py2.py3-none-any.whl
  Saved ./funcsigs-1.0.2-py2.py3-none-any.whl
Collecting google-cloud-bigquery (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 3))
  Using cached https://files.pythonhosted.org/packages/41/2c/e4da0278a5fd8e71710cfded98c13a5ed2ecb66c704fc4feb3734e8c027d/google_cloud_bigquery-1.27.2-py2.py3-none-any.whl
  Saved ./google_cloud_bigquery-1.27.2-py2.py3-none-any.whl
Collecting nose>=1.3.7 (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 4))
  Using cached https://files.pythonhosted.org/packages/15/d8/dd071918c040f50fa1cf80da16423af51ff8ce4a0f2399b7bf8de45ac3d9/nose-1.3.7-py3-none-any.whl
  Saved ./nose-1.3.7-py3-none-any.whl
Collecting protobuf (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 5))
  Using cached https://files.pythonhosted.org/packages/eb/79/feb55f5a6c8bd48d79beeb80c11299eb0d378c6df8ca0f33f91d8eda637b/protobuf-3.13.0-cp38-cp38-macosx_10_9_x86_64.whl
  Saved ./protobuf-3.13.0-cp38-cp38-macosx_10_9_x86_64.whl
Collecting python-dateutil>=2.8.1 (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/d4/70/d60450c3dd48ef87586924207ae8907090de0b306af2bce5d134d78615cb/python_dateutil-2.8.1-py2.py3-none-any.whl
  Saved ./python_dateutil-2.8.1-py2.py3-none-any.whl
Collecting request (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 7))
 (  Could not find a version that satisfies the requirement request (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 7)) (from versions: )
No matching distribution found for request (from -r /private/var/tmp/_bazel_emilylewis/6ed13ea54d141d16d801a31bd3ba8818/external/com_google_fhir/bazel/requirements.txt (line 7))
)
INFO: Elapsed time: 3.056s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (0 packages loaded)```
nikklassen commented 4 years ago

I tried to reproduce and I got different, but similar issues with the pip install

Could not find a version that satisfies the requirement tensorflow<2.0.0,>=1.12.0
nickgeorge commented 4 years ago

@nikklassen that is because tensorflow < 2.0.0 doesn't work with python 3.8 :(

Until we upgrade tensorflow to 2.x you'll need to ensure you're using python <3.8. All of this will go away in The Next Release when we eliminate the python depenency on tensorflow in the core fhir lib.