Project dependencies may have API risk issues

[PyDeps]

Hi, In model_search, inappropriate dependency versioning constraints can cause risks.

Below are the dependencies and version constraints that the project is using

six==1.15.0
sklearn==0.0
tensorflow==2.6.0
tensorflow-estimator==2.6.0
keras==2.6.0
absl-py==0.10.0
tf-slim==1.1.0
ml-metadata==0.26.0
keras-tuner==1.0.3
mock==4.0.3

The version constraint == will introduce the risk of dependency conflicts because the scope of dependencies is too strict. The version constraint No Upper Bound and * will introduce the risk of the missing API Error because the latest version of the dependencies may remove some APIs.

After further analysis, in this project, The version constraint of dependency six can be changed to >=1.5.0,<=1.6.1. The version constraint of dependency keras-tuner can be changed to >=1.0.3,<=1.1.3.

The above modification suggestions can reduce the dependency conflicts as much as possible, and introduce the latest version as much as possible without calling Error in the projects.

The invocation of the current project includes all the following methods.

The calling methods from the six

six.iteritems

The calling methods from the keras-tuner

keras_tuner.HyperParameters
keras_tuner.oracles.BayesianOptimizationOracle
keras_tuner.HyperParameters.Choice
keras_tuner.HyperParameters.Int
keras_tuner.oracles.RandomSearchOracle
keras_tuner.HyperParameters.merge
keras_tuner.HyperParameters.Float

The calling methods from the all methods

absl.logging.warning
_pad_to_match
model.fit.fit
AssertionError
_merge_hparams.keys
self._discount
level.startswith
self.get_polynomial_expansion.fill
has_distillation
self.batch_sample
search_tower.hparams.CopyFrom
numpy.random.randint
input_layer_fn
self._add_residual_connection
absl.flags.DEFINE_float
self._default_metric_fn_list.append
_compute_tolerance
tensorflow.compat.v2.compat.v1.layers.dropout
tensorflow.compat.v2.compat.v1.logging.warning
numpy.random.random
_reuse_fail
tensorflow.compat.v2.reshape
self.get_polynomial_expansion.append
NotImplementedError
model_search.oss_trainer_lib.run_parameterized_train_and_eval
self._save_architecture
model_search.phoenix.Phoenix.get_estimator
self.values
suggest_and_create_architecture_fn
metrics_dict.update
as_bytes
self._store.put_execution_type
sklearn.preprocessing.OneHotEncoder
set_parameter
tensorflow.compat.v2.compat.v1.train.get_or_create_global_step
lstm1.tf.keras.layers.RNN
tensorflow.compat.v2.clip_by_global_norm
inspect.isfunction
_contains_row
tensorflow.compat.v2.nn.bias_add
sklearn.linear_model.Ridge
init_variables
ml_metadata.proto.metadata_store_pb2.ConnectionConfig
issubclass
tensorflow.compat.v1.keras.activations.serialize
TypeError
self.SearchCandidateGenerator.super.__init__
tensorflow.python.feature_column.feature_column_lib.is_feature_column_v2
as_str
generators.keys
tensorflow.compat.v1.expand_dims
self.Estimator.super.evaluate.items
kwargs.get
self._kernel_size.tf.keras.layers.AveragePooling2D
self._ensembler.bundle_logits
self._add_projection_if_needed.get_shape
tensorflow.compat.v2.compat.v1.tpu.CrossShardOptimizer
towers.items
set
ml_metadata.metadata_store.MetadataStore
scope.block_type.block_builder.BlockType.blocks.get_new
tensorflow.compat.v2.keras.optimizers.SGD
numpy.copy
range
tensorflow.compat.v2.nn.relu
model_search.architecture.architecture_utils.construct_tower
self.SvdfConvLayer.super.get_config
self._kernel_size.tf.keras.layers.MaxPool2D
reductions.append
loss_fn
getattr
model_search.ensembler.Ensembler
self._get_user_suggestion
curve.lower
activations.get_shape
numpy.empty
self._get_polynomial_expansion
tensorflow.compat.v1.reshape
input_indices_padded_np.tolist.append
_make_auc_metric_fn
coefficients.assignments.np.matmul.np.square.reshape
model_search.registry.lookup_all
ModelSearchTuner.search
values_dict.items
model_search.search.linear_model.LinearModel
model_search.ops.svdf_cell.SvdfCell
model_search.architecture.architecture_utils.get_architecture.copy
get_hparams_from_dir
search_space.np.meshgrid.np.array.T.reshape
enum.IntEnum
self._get_loss_fn
get_dataset_provider.get_input_fn
self._projection_size.tf.keras.layers.Dense
tensorflow.compat.v2.feature_column.numeric_column
input_tensors.get_shape.as_list
input_tensor.get_shape.as_list
hparam_def.hparam.items
self._combine_previous_trial_variables
var.assign
self._init_from_proto
self.generator_name
model_search.oss_trainer_lib.loss_and_metric_and_predictions_fn
model_search.search.common.write_fork_edge
svdf_conv_layer
FLAGS.is_parsed
self._create_task_spec
towers.values
get_architecture
absl.logging.info
self.FullyConnectedPyramidBlock.super.__init__
self._add_reduction_blocks
tensorflow.compat.v1.keras.backend.dropout
setattr
tensorflow.compat.v2.lookup.StaticVocabularyTable.lookup
json.loads
Task.add_initialization
generator_name.task_towers.append
output.update
model_search.hparam.HParams.from_proto
tensorflow.compat.v2.compat.v1.assign
model_search.hparams.hyperparameters.Hyperparameters
model_search.generators.trial_utils.is_adaptive_ensemble_search
replay_spec.replay.towers.add
self.get_feature_columns
tensorflow.compat.v2.keras.layers.MaxPool2D
InputSelector
numpy.arange
model_search.metric_fns.combine_metric_fns
tensorflow.compat.v2.io.gfile.makedirs
self.IncreaseChannelsBlock.super.__init__
shape.as_list.as_list
cmath.exp
features_dataset.repeat.shuffle
dataset.cache.prefetch
optimizer._OPTIMIZERS
inspect.isclass
self._head.loss
extract_task_specific
previous_architecture.copy
model_search.block_builder.Blocks
model_search.meta.distillation.Distiller
numpy.flatnonzero
numpy.unique
model_search.architecture.architecture_utils.get_parameter
keras_tuner.oracles.BayesianOptimizationOracle._set_project_dir
train_losses.append
train_dataset.cache.prefetch
self._kernel_rank.tf.keras.layers.Dense
self._task_manager.create_model_spec
keras_tuner.oracles.BayesianOptimizationOracle.update_trial
kind.name.hparam_proto.hparam.getattr.value.extend
lstm.tf.keras.layers.RNN
self.build_priors_distillation
model_search.utils.last_activations_in_sequence
registry.items
model_search.architecture.architecture_utils.set_parameter
self._metadata.after_generating_trial_model
self.Tower.super.__init__
model_search.hparams.hyperparameters.Hyperparameters.merge
self.RnnBlock.super.__init__
tensorflow.compat.v2.keras.layers.Conv2D
tensorflow.compat.v2.keras.layers.AveragePooling2D
task_tower
tensorflow.compat.v2.compat.v1.nn.dynamic_rnn
format
self._remove_reduction_blocks
tensorflow.compat.v2.strided_slice
self.override_from_dict
tensorflow.compat.v2.lookup.StaticVocabularyTable
tensorflow.compat.v2.unstack
os.path.join
features_dataset.repeat.shuffle.repeat
tensorflow.compat.v2.compat.v1.get_collection.items
block_types_np.tolist.append
model_search.proto.hparam_pb2.HParamDef
phoenix_instance.get_estimator.export_saved_model
keras_tuner.oracles.BayesianOptimizationOracle.end_trial
tensorflow.compat.v2.compat.v1.train.SyncReplicasOptimizer.make_session_run_hook
numpy.insert
self.get_trial_dir
GeneratorWithTrials
name.split
model_search.task_manager.TaskManager
model_search.phoenix.Phoenix.get_tpu_estimator
tensorflow.compat.v2.compat.v1.summary.image
hooks_list.extend
model_search.generators.trial_utils.write_replay_spec
model_search.generators.trial_utils.is_residual_ensemble_search
tensorflow.compat.v2.compat.v1.global_variables
model_search.generators.prior_generator.PriorGenerator
node.block_builder.block_build
session.run
tensorflow.compat.v2.compat.v1.placeholder
self._dilation_rate.self._kernel_size.input_tensor.get_channel_dim.tf.keras.layers.Conv2D
cls.LogitsSpec.super.__new__
_merge_hparams
increase_structure_depth
LogitsSpec
HParams._get_kind_name
self.AveragePoolBlock.super.__init__
numpy.abs
self._load_trials
model_search.data.data.register_provider
self.create_logits_spec
numpy.random.seed
keras_tuner.HyperParameters.Choice
replay_spec.replay.towers.add.CopyFrom
self._write_model
learning_rate_spec.get
logits.get_shape.as_list
ReplayState
run_keras_parameterized_train_and_eval
get_dataset_provider.get_serving_input_fn
self.SvdfConvLayer.super.__init__
get_dataset_provider.number_of_classes
self._replay_state.replay_is_training_a_tower
_add_projection_if_needed
msg.format
tensorflow.compat.v2.size
predictions_fn
no_partion_map.keys
tensorflow.compat.v2.reduce_mean
self.SvdfConvLayer.super.get_config.items
model_search.architecture.tower.Tower
absl.flags.mark_flag_as_required
model_search.block_builder.Blocks.get_new
model_search.search.common.get_allowed_depth
staticmethod
self.translate_architecture_to_feature_assignment
IdentityCombiner
provider.get_predictions_fn
model_search.generators.trial_utils.get_trial_mode
self.DualResnetBlock.super.__init__
self._pad_architecture
keras_tuner.HyperParameters.merge
self.Block.super.__init__
varscope.reuse_variables
encoder.fit_transform.reshape
absl.flags.DEFINE_string
tensorflow.compat.v2.compat.v1.reset_default_graph
super
tensorflow.compat.v2.errors.FailedPreconditionError
train_hooks_list.extend
self._metadata.get_completed_trials
tensorflow.compat.v2.compat.v1.metrics.accuracy
model_search.generators.trial_utils.get_intermixed_trials
keras_tuner.oracles.BayesianOptimizationOracle.update_space
numpy.array.pop
tensorflow.compat.v2.loggin.warning
coefficients.assignments.np.matmul.np.square.reshape.sum
shape_maps.append
task_spec_list.append
model_search.architecture.architecture_utils.get_tower_variables
tensorflow.compat.v2.estimator.export.build_raw_serving_input_receiver_fn
model_search.architecture.architecture_utils.get_hparams_from_dir
phoenix_instance.get_estimator.evaluate
Task.get_task
self.FixedOutputFullyConnectedBlock.super.__init__
self._controller.get_generators
delattr
towers.append
model_search.generators.replay_generator.ReplayGenerator
cls.ModelSpec.super.__new__
train_op_list.extend
_cast_to_type_if_compatible
tensorflow.compat.v2.keras.backend.clear_session
self._create_weighted_ensemble_logits
self.BottleNeckBlock.super.__init__
modes.append
model_search.data.utils.default_get_input_layer_fn
tensorflow.compat.v1.keras.initializers.get
ModelSpec
self.block_build
self._pool_size.tf.keras.layers.MaxPool2D
self.build_priors_nonadaptively
self.BidirectionalLSTMBlock.super.__init__
tensorflow.compat.v2.compat.v1.train.SyncReplicasOptimizer
copy.deepcopy
_one_nonzero_per_row
self._add_projection_if_needed
tensorflow.compat.v2.compat.v1.zeros_initializer
tensorflow.compat.v2.data.experimental.AUTOTUNE._map_fn.features_dataset.map.prefetch.batch
any
numpy.argmin
self._store.get_executions_by_type
inspect.getargspec
tensorflow.compat.v2.train.latest_checkpoint
tensorflow.compat.v2.keras.optimizers.Adagrad
model_search.architecture.architecture_utils.increase_structure_depth
_merge_hparams.override_from_dict
f.read.split
random.randint
self._kernel_size.input_tensor.get_channel_dim.tf.keras.layers.Conv2D
self._stride.self._kernel_size.self._num_filters.tf.keras.layers.Conv2D
tensorflow.compat.v2.stack
keras_tuner.oracles.BayesianOptimizationOracle.create_trial
tensorflow.compat.v2.cast
input_tensors.get_shape
_json_to_python_object
model_search.architecture.architecture_utils.LogitsSpec
provider.get_metric_fn
tensorflow.compat.v2.compat.v1.estimator.tpu.TPUEstimator
tensorflow.compat.v2.compat.v1.train.SyncReplicasOptimizer.apply_gradients
init_args.update
numpy.matmul
towers.compile
tensorflow.compat.v2.nn.conv1d
filter
self._hparam_types.keys
tensorflow.compat.v2.io.gfile.rmtree
absl.flags.DEFINE_integer
self._metadata.get_best_k
self.first_time_chief_generate
tensorflow.compat.v2.nn.log_softmax
sorted
hparams.values.items
tensorflow.compat.v2.math.log1p
tensorflow.compat.v2.control_dependencies
tensorflow.compat.v2.compat.v1.losses.sigmoid_cross_entropy
tensorflow.compat.v2.compat.v1.name_scope
self.SvdfConvLayer.super.build
tensorflow.compat.v1.keras.backend.squeeze
self._activation
tensorflow.compat.v2.keras.optimizers.schedules.PiecewiseConstantDecay
_merge_hparams.copy
y.append
self.Task.super.call
tensorflow.compat.v2.compat.v1.train.init_from_checkpoint
all
kwargs.lower
tensorflow.compat.v2.nn.l2_loss
numpy.array
self.ModelSearchTuner.super.run_trial
model_search.registry.get_base_enum.update
scope_name.is_training.feature_columns.tf.keras.experimental.SequenceFeatures
bool
model_search.architecture.architecture_utils.DirectoryHandler.trial_dir
model_search.generators.trial_utils.non_adaptive_or_intermixed_ensemble
numpy.concatenate
tensorflow.compat.v2.shape
has_ensemble_search
os.path.basename
model.fit.predict
model_search.generators.trial_utils.adaptive_or_residual_ensemble
generator.instance.generate.add_feature_columns_input_layer
f.write
self.keras_model_builder
self._store.put_executions
model_search.registry.get_base_enum
input_indices_lengths_np.tolist.append
get_trial_dir
self.ReplayGenerator.super.__init__
model_search.search.constrained_descent.ConstrainedDescent
get_hparams_from_dir.values
lstm2.tf.keras.layers.RNN
tensorflow.compat.v1.keras.initializers.serialize
tower
model_search.generators.trial_utils.import_towers_one_trial
cls.GeneratorWithTrials.super.__new__
tensorflow.compat.v2.train.load_checkpoint.has_tensor
ml_metadata.proto.metadata_store_pb2.Execution
is_adaptive_ensemble_search
get_dataset_provider.get_keras_input
tensorflow.compat.v2.keras.preprocessing.image_dataset_from_directory
sklearn.linear_model.Lasso
tensorflow.compat.v2.compat.v1.losses.absolute_difference
tensorflow.compat.v2.compat.v1.estimator.tpu.RunConfig
_default_depth_thresholds
self._metadata.before_generating_trial_model
hasattr
_get_optimizer_fn
task.name.predictions_fn.extract_task_specific.items
enumerate
model_search.metric_fns.make_auc_roc_metric_fn
rnn_cell.tf.keras.layers.RNN
readers.append
all_layers.append
cls.TowerSpec.super.__new__
self._filename.replace
tensorflow.compat.v2.matmul
RuntimeError
overrides.values
model_search.architecture.architecture_utils.set_number_of_towers
keras_tuner.oracles.BayesianOptimizationOracle
os.environ.get
os.path.dirname
re.split
self._head.create_loss
self.GeneralBlock.super.__init__
model_search.metadata.trial.get_best_k
tensorflow.compat.v2.train.load_checkpoint
model_search.architecture.architecture_utils.init_variables
Estimator
self.Tower.super.save
towers.keys
self.set_hparam
Node
keras_tuner.oracles.BayesianOptimizationOracle.save
self._run_svdf_conv_calculation
self.SvdfBlock.super.__init__
model_search.search.coordinate_descent.CoordinateDescent
tensorflow.compat.v2.compat.v1.constant_initializer
parse_values
outputs.get_shape.as_list
_map_fn.features_dataset.map.prefetch
model_search.hparam.HParams.to_proto
tensorflow.compat.v2.math.argmax
HParams
pandas.read_csv
tensorflow.compat.v2.compat.v1.Session.reset
self._increment_global_step
architecture.copy.append
model_search.search.common.get_random_block
absl.flags.DEFINE_bool
model_search.search.common.random
pre_logits.get_shape.as_list
model_search.ops.svdf_conv.SvdfConvLayer
net.get_shape.max.max_output_size.min.tf.keras.layers.Dense
value.items
tensorflow.compat.v2.concat.get_shape
numpy.random.choice
self.bn_scale.tf.keras.layers.BatchNormalization
zip
tensorflow.compat.v2.keras.optimizers.Adam
self._create_average_ensemble_logits
tensorflow.compat.v2.compat.v1.get_variable
tensorflow.compat.v2.data.experimental.CsvDataset
google.protobuf.text_format.Parse
pandas.read_csv.pop
relevant_variables.extend
numpy.percentile
HParams._get_kind_name.startswith
self.Task.super.__init__
spec._replace
loss2_fn
i.item
self.FixedChannelConvolutionBlock.super.__init__
pre_logits.get_shape
isinstance
tensorflow.compat.v2.nn.softmax
self._strides.self._kernel_size.self._max_channels.net.get_channel_dim.min.tf.keras.layers.Conv2D
self.save_to_graph
tensorflow.compat.v1.keras.backend.sum
inputs.get_shape.as_list
outputs.get_shape.as_list.tf.keras.layers.Dense
tensorflow.compat.v2.pad
self.get_polynomial_expansion
tensorflow.compat.v1.keras.backend.temporal_padding
tensorflow.compat.v2.compat.v1.trainable_variables
tensorflow.compat.v2.compat.v1.disable_eager_execution
self._phoenix_spec.HasField
tensorflow.compat.v2.constant
overrides.values.items
self._metric_fn
d.keys.collections.namedtuple
tensorflow.compat.v2.train.load_checkpoint.get_tensor
tensorflow.compat.v2.compat.v1.variable_scope
tensorflow.compat.v1.keras.activations.get
tensorflow.compat.v2.transpose
get_random_block
self._convert_to_trial_object
ValueError
reader.get_tensor.tolist
tensorflow.compat.v2.keras.layers.Flatten.get_shape
type
self._output_size.tf.keras.layers.Dense
train_op_fn
max
tensorflow.compat.v1.nn.depthwise_conv2d
model_search.generators.trial_utils.is_intermixed_ensemble_search
inspect.signature
model_search.phoenix.Phoenix.get_keras_hyperparameters_space
numpy.asarray
_merge_train_op_list
d.values
sklearn.linear_model.Lasso.fit
labels.items
tensorflow.compat.v2.train.load_checkpoint._GetVariableToDataTypeMap
absl.logging.vlog
t_dir.os.path.basename.isdigit
tensorflow.compat.v1.add
loss_and_metric_and_predictions_fn
sklearn.preprocessing.OneHotEncoder.fit_transform
self._metadata.unblock_stopped_infeasible_trial
_merge_hparams.add_hparam
tensorflow.compat.v1.keras.activations.serialize.items
get_dataset_provider
tensorflow.compat.v2.lookup.KeyValueTensorInitializer
register_block
architectures.append
strip_scope
tensorflow.compat.v1.keras.backend.in_train_phase
get_parameter
tensorflow.compat.v1.keras.layers.InputSpec
model_search.search.common.get_random_architecture
child_metric_fn
self.Estimator.super.evaluate
value.WhichOneof
google.protobuf.text_format.Merge
self.add_hparam
self._get_trial_from_id
numpy.amax
self._get_allowed_depth
Tower.add_initialization
provider.get_loss_fn
join
model_search.search.categorical_harmonica.Harmonica
task.name.predictions_fn.extract_task_specific
model_search.hparam.HParams.set_hparam
filters.get_shape
six.iteritems
self._exists
bytes_or_text.encode
set_architecture
tensorflow.compat.v2.keras.layers.Dense
self._get_svdf_conv_output
self.Conv1DBlock.super.__init__
model_search.search.common.choose_random_trial_and_get_architecture
PolynomialFeatures
tensorflow.compat.v2.compat.v1.train.exponential_decay
node.combiner
absl.logging.fatal
parse_fn
str
tensorflow.compat.v1.keras.layers.BatchNormalization
tensorflow.compat.v2.range
train_op_list.append
self.keras_compile
generator.instance.generate.has_input_tensor
collections.namedtuple
self.DilatedConvolutionBlock.super.__init__
directory.split
tensorflow.compat.v2.keras.optimizers.RMSprop
tensorflow.compat.v2.gather
is_training.fc_v2.tf.keras.layers.DenseFeatures
onehot_best.encoder.inverse_transform.flatten
self._assign_ops.append
self.values.items
var_name.replace
tensorflow.compat.v2.compat.v1.metrics.auc
tensorflow.compat.v2.expand_dims.get_shape
float
run_train_and_eval
model_search.block_builder.BlockType
tensorflow.compat.v2.train.load_checkpoint.get_variable_to_shape_map
generator.instance.generate
dimension.tf.keras.layers.Dense
numpy.argsort
self.LSTMBlock.super.__init__
model_search.ensembler.EnsembleLogits
self.DownsampleConvolutionBlock.super.__init__
self._input_dir.replace
tensorflow.compat.v2.minimum
model_search.phoenix.Phoenix
self._hparam_types.items
model_search.generators.search_candidate_generator.SearchCandidateGenerator
FLAGS.record_defaults.split
self._sort_previous_trial_variables
is_intermixed_ensemble_search
tensorflow.compat.v2.compat.v1.estimator.tpu.TPUConfig
tensorflow.compat.v1.executing_eagerly
_generate_dropout_mask
self._oracle._set_project_dir
results_dictionary.get
model_search.generators.trial_utils.import_towers_multiple_trials
_merge_hparams.set_hparam
numpy.meshgrid
model_search.architecture.architecture_utils.get_blocks_search_space
output_tensor.shape.tf.keras.layers.Dense
tensorflow.compat.v2.compat.v1.assign_add
self._get_svdf_rnn_cell_output
logits_dimension.tf.keras.layers.Dense
param_type
model_search.search.common.block_indices
train_hooks.append
Task.load
tensorflow.compat.v1.shape
tf_slim.fully_connected
self._distiller.bundle_logits
next
tuple
six.moves.range
model_search.data.utils.default_get_keras_input_layer_fn
modes.sort
hparams.projection_size.tf.keras.layers.Dense
_process_scalar_value
model_search.search.identity.Identity
self.PriorGenerator.super.__init__
phoenix_instance.get_estimator.train
bytes_or_text.decode
self.build_priors_adaptively
phoenix_spec.HasField
model_search.registry.lookup
numpy.append
tensorflow.compat.v2.convert_to_tensor
tensorflow.compat.v2.compat.v1.layers.conv1d
self.FullyConnectedBlock.super.__init__
tensorflow.compat.v2.keras.experimental.SequenceFeatures
self.get_train_and_eval_logits
var_name.endswith
collections.defaultdict
model_search.hparam.HParams
inputs.get_shape
losses.append
input_key_b.decode
model_search.proto.phoenix_spec_pb2.PhoenixSpec.HasField
os.path.basename.isdigit
get_block_hparams
create_tower_spec
is_residual_ensemble_search
self.MaxPoolingBlock.super.__init__
result.append
json.dumps
copy.deepcopy.ClearField
self._replay_state.replay_is_importing_towers
tensorflow.compat.v2.config.run_functions_eagerly
tensorflow.compat.v2.reduce_sum
supply_params_if_needed
model_search.generators.trial_utils.has_distillation
final_args.update
model_search.architecture.tower.Tower.load
train_dataset.cache.prefetch.cache
ModelSearchTuner
self.DownsampleFlattenBlock.super.__init__
model_search.search.common.mutate_replace
model_search.metric_fns.make_accuracy_metric_fn
model_search.controller.InProcessController
tensorflow.compat.v2.expand_dims
absl.flags.DEFINE_enum
map
tensorflow.compat.v2.keras.layers.RNN
bytes
tensorflow.compat.v2.keras.layers.DenseFeatures
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@developer Could please help me check this issue? May I pull a request to fix it? Thank you very much.