In order to make execution of DeepVariant easier for new users, we introduced an automatic method for setting computational flags based on the size of input BAM file.
This is our best effort to reduce the cost of running DeepVariant. We ran extensive profiling experiments to find the optimal settings for both WGS and WES inputs.
In order to make execution of DeepVariant easier for new users, we introduced an automatic method for setting computational flags based on the size of input BAM file.
This is our best effort to reduce the cost of running DeepVariant. We ran extensive profiling experiments to find the optimal settings for both WGS and WES inputs.