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googlegenomics / gcp-deepvariant-runner

This repository contains a docker container that runs DeepVariant on the Google Cloud Platform.
Apache License 2.0
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Try both common naming convensions for missing BAI file #23

Closed samanvp closed 5 years ago

samanvp commented 5 years ago

For a give bam file (such as abc_zyx.bam) there are two convensions for its accompanying index file:

If the index file is missing we will try both names.