wdl_runner: Add retries to setup.sh (used by wdl_pipeline_from_git.yaml)

googlegenomics / pipelines-api-examples

Examples for the Google Genomics Pipelines API.

BSD 3-Clause "New" or "Revised" License

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wdl_runner: Add retries to setup.sh (used by wdl_pipeline_from_git.yaml) #36

Closed mbookman closed 7 years ago

mbookman commented 7 years ago

Makes setup.sh more robust to network or server failures. Reformats the docker command in wdl_pipeline_from_git.yaml to demonstrate how to more cleanly implement a multi-line "command". Adds us-west zones to the basic.jes.us.options.json.

deflaux commented 7 years ago

LGTM