API tests for bundles with and without variants - Githubissues

gosh-dre / gmsa_genomic_fhir_webapp

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API tests for bundles with and without variants #71

Closed stefpiatek closed 2 years ago

stefpiatek commented 2 years ago

    okay let's smash this one out! We'll need two different tests for each of these cases

for the bundle with no variants you can update the "Bundle without variants" test (currently on 148) to submit the bundle, and then do the checks on the response from the fhir api.
for the bundle with variants you'll want to find all observations with the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant. and there should only be one of those

_Originally posted by @stefpiatek in https://github.com/gosh-dre/gmsa_genomic_fhir_webapp/pull/65#discussion_r989242163_