In the <outprefix>.annotated.gtf file, there is an attribute named tss_id. I noticed that transfrags with slightly different start positions share the same tss_id, but couldn't find any mention on this in the documentation. What is the rule that assigns the same tss_id to transfrags with different start positions?
In the
<outprefix>.annotated.gtffile, there is an attribute namedtss_id. I noticed that transfrags with slightly differentstartpositions share the sametss_id, but couldn't find any mention on this in the documentation. What is the rule that assigns the sametss_idto transfrags with differentstartpositions?