Open BeatrizdeToledo opened 3 years ago
I am also running into this issue. I can't find a way to disable discarding duplicate transfrags within the same sample. I also tried -d 0 -s 0 --strict-match, but it still does that. Have you found a way around that?
Good evening, I would like to use the GFF compare for comparing two gtf files generated from long-read sequencing. However, part of the duplicate query transfrags discarded, and I can not find a way to disable it. this was the code gffcompare --no-merge file1.gtf file2.gtf --strict-match
Thank you beatriz