Can '--mix' option integrate CAGE data and Iso-seq?

gpertea / stringtie

Transcript assembly and quantification for RNA-Seq

MIT License

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Can '--mix' option integrate CAGE data and Iso-seq? #346

Open Jung19911124 opened 2 years ago

Jung19911124 commented 2 years ago

Hi,

I have CAGE-seq data, RNA-seq data and PacBio Iso-seq data derived from the same sample. I have been trying to find tools to build transcript models using these different types of transcriptome data . Is it possible for new '--mix' option to deal with CAGE-seq data as normal RNA-seq data for transcriptome assembly?

Thanks in advance, Jung