Closed chickenHyop closed 1 year ago
Hi, I was trying to execute prepDE.py and I get the following error:
$ prepDE.py -i sample_gene.lst Error: could not locate transcript ENST00000618889 entry for sample CASE2 Traceback (most recent call last): File "/data/leehyobin/Step0_RawFile/stringtie/stringtie/prepDE.py", line 284, in geneDict.setdefault(geneIDs[i],{}) #gene_id KeyError: 'ENST00000618889'
What can I do to solve this error? Do you have any idea why this error is occurring? 😥
Cross-posted here.
fomightez
commented
1 year ago
Hi, I was trying to execute prepDE.py and I get the following error:
$ prepDE.py -i sample_gene.lst Error: could not locate transcript ENST00000618889 entry for sample CASE2 Traceback (most recent call last): File "/data/leehyobin/Step0_RawFile/stringtie/stringtie/prepDE.py", line 284, in
geneDict.setdefault(geneIDs[i],{}) #gene_id
KeyError: 'ENST00000618889'
What can I do to solve this error? Do you have any idea why this error is occurring? 😥