gpertea / stringtie

Transcript assembly and quantification for RNA-Seq
MIT License
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Stringtie --merge -c #405

Open SEVEN-XYCHEN opened 1 year ago

SEVEN-XYCHEN commented 1 year ago

Hello, I would like to know how the coverage in the output file is calculated? And is the --merge -c parameter simply filtering out transcripts with unqualified coverage in each sample? Thank you very much for taking the time to answer my question! Looking forward to your reply.