Open nayan-bhowmik opened 2 months ago
Hello!
I am getting the following error for stringtie command: stringtie -o outputfile -G annotationfile bamfile "Error: no valid ID found for GFF record Aborted (core dumped)"
I am using the gtf file downloaded from the ncbi: https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_002263795.3/
Any help would be highly appreciated!
Thanks, Nayan
I have tried with the gff version 3 file; now it is working.
Hello!
I am getting the following error for stringtie command: stringtie -o outputfile -G annotationfile bamfile "Error: no valid ID found for GFF record Aborted (core dumped)"
I am using the gtf file downloaded from the ncbi: https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_002263795.3/
Any help would be highly appreciated!
Thanks, Nayan