@nckz identified this on GitLab a while ago — I can confirm it is still an issue in GPI 1.1.6.
Here is the error message I get in a Python 3.8 environment:
Thu Jan 16 10:33:46 2020 - gpi.network:367 - ERROR - Saving network failed. Traceback (most recent call last):
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/site-packages/gpi/network.py", line 364, in save
json.dump(self._contents, fptr, sort_keys=True, indent=1)
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/__init__.py", line 179, in dump
for chunk in iterable:
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 431, in _iterencode
yield from _iterencode_dict(o, _current_indent_level)
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 405, in _iterencode_dict
yield from chunks
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 405, in _iterencode_dict
yield from chunks
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 325, in _iterencode_list
yield from chunks
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 405, in _iterencode_dict
yield from chunks
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 405, in _iterencode_dict
yield from chunks
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 325, in _iterencode_list
yield from chunks
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 405, in _iterencode_dict
yield from chunks
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 405, in _iterencode_dict
yield from chunks
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 438, in _iterencode
o = _default(o)
File "/Users/m206107/gpi_stack/envs/gpi38/lib/python3.8/json/encoder.py", line 179, in default
raise TypeError(f'Object of type {o.__class__.__name__} '
TypeError: Object of type ndarray is not JSON serializable
@nckz identified this on GitLab a while ago — I can confirm it is still an issue in GPI 1.1.6.
Here is the error message I get in a Python 3.8 environment: