gqi / DAESC

10 stars 1 forks source link

Identifying imprinted genes from reciprocal cross and scRNA-seq data #4

Open singcell opened 9 months ago

singcell commented 9 months ago

I am impressed by your tool and would like to leverage its capabilities in my research. Using a reciprocal mouse strain cross, I have generated stem cell lines from two distinct rat strains with characterized SNPs. I have performed scRNA-seq on these cell lines from both reciprocal crosses. I am specifically interested in identifying imprinted genes within this dataset using your DAESC algorithm. Can you please advise on the best approach to integrate my SNP and scRNA-seq data into your tool for this purpose?

Thank you