Occasional garbage in megatest output with Python-2.4

GoogleCodeExporter commented 9 years ago

See the second post in this thread for what happens when they do:

http://groups.google.com/group/pygr-dev/browse_thread/
thread/1a7a9fa6e2af6d4d

and the second in this one for more information about this not happening 
every time:

http://groups.google.com/group/pygr-dev/browse_thread/
thread/62f67b72da553896

Original issue reported on code.google.com by mare...@gmail.com on 26 Aug 2009 at 1:59

GoogleCodeExporter commented 9 years ago

Clarified the title.

Original comment by mare...@gmail.com on 26 Aug 2009 at 2:04

Changed title: Occasional garbage in megatest output with Python-2.4

GoogleCodeExporter commented 9 years ago

Check #103 http://code.google.com/p/pygr/issues/detail?id=103 for more details. 
You 
can use same script.

Original comment by deepr...@gmail.com on 31 Aug 2009 at 11:09

GoogleCodeExporter commented 9 years ago

Full megatest in Python2.3 also gives garbage output.

One little difference I found is that Python2.5 or higher makes 5 .idb.

-rw-rw-r-- 1 deepreds deepreds 174581760 Sep  1 10:08 snp126_hg180.idb
-rw-rw-r-- 1 deepreds deepreds         0 Sep  1 10:08 snp126_hg181.idb
-rw-rw-r-- 1 deepreds deepreds         0 Sep  1 10:08 snp126_hg182.idb
-rw-rw-r-- 1 deepreds deepreds  81881088 Sep  1 10:08 snp126_hg183.idb
-rw-rw-r-- 1 deepreds deepreds         0 Sep  1 10:08 snp126_hg184.id

But, Python2.3 and Python2.4 generate only two .idb files.

-rw-rw-r-- 1 deepreds deepreds 256456704 Sep  2 23:02 snp126_hg180.idb
-rw-rw-r-- 1 deepreds deepreds         0 Sep  2 23:02 snp126_hg181.idb

Is it OK to make different .idb files according to the Python version?

Original comment by deepr...@gmail.com on 2 Sep 2009 at 2:42

graehl / pygr

Occasional garbage in megatest output with Python-2.4 #104