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graph-genome / component_segmentation

Read in ODGI Bin output and identify co-linear components
Apache License 2.0
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Change bin-size to bin-width so we have consistent naming across tools #6

Closed subwaystation closed 4 years ago

subwaystation commented 4 years ago

Reported by @6br in #5 . Thanks!

josiahseaman commented 4 years ago

Is odgi using the term bin-width? To me, a size is pure math. Whereas a width implies a physical object that's probably two dimensional, so it sounds more like a rendering parameter.

subwaystation commented 4 years ago

Yes, there is a --bin-width parameter in odgi.

josiahseaman commented 4 years ago

I'll take responsibility for this. Since I'm updating file formats across tools anyways. JSON_VERSION = 9 Note that at the moment, schematize is on branch i13_data_folders