grasool / Load_ct_data

I am trying to load CT data
0 stars 1 forks source link

File load issue #1

Open JehandadKhan opened 5 years ago

JehandadKhan commented 5 years ago

@grasool can you confirm if the files in Not_Working are valid and correct. From the error it looks like either the file is corrupt or has a feature that the pyDICOM library does not support.

grasool commented 5 years ago

They are valid and correct. As you can see that from the metadata.

Or you can load these files in any DICOM viewer, i.e., RadiAnt (https://www.radiantviewer.com/).

JehandadKhan commented 5 years ago

Ok, I will investigate it further On Mon, Feb 18, 2019 at 3:12 PM Ghulam Rasool notifications@github.com wrote:

They are valid and correct. As you can see that from the metadata.

Or you can load these files in any DICOM viewer, i.e., RadiAnt ( https://www.radiantviewer.com/).

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/grasool/Load_ct_data/issues/1#issuecomment-464880821, or mute the thread https://github.com/notifications/unsubscribe-auth/AFXcuXpNmGEvVQSPB4T7OKmzZS7MDeWsks5vOxdPgaJpZM4bBd7r .

JehandadKhan commented 5 years ago

Not a big fan of windows ....

JehandadKhan commented 5 years ago

The issue is in pillow while the transfer syntax for the Not_Working images should be supported by pillow it errors out while trying to read the image. Our best bet right now is to either use GDCM to read these images or open an issue on pillow's github repo

grasool commented 5 years ago

GDCM?

JehandadKhan commented 5 years ago

Its an alternative to Pillow as a backend for reading images. On Sat, Feb 23, 2019 at 3:01 PM Ghulam Rasool notifications@github.com wrote:

GDCM?

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/grasool/Load_ct_data/issues/1#issuecomment-466694539, or mute the thread https://github.com/notifications/unsubscribe-auth/AFXcuTj5IT3K3VwUQScRa6G6rRQFfifCks5vQaw6gaJpZM4bBd7r .